| Package | Description |
|---|---|
| net.sourceforge.seqware.common.business |
Looks like auto-generated classes for Hibernate.
|
| net.sourceforge.seqware.common.business.impl |
Looks like auto-generated implementation for Hibernate classes.
|
| net.sourceforge.seqware.common.dao |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.dao.hibernate |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.hibernate |
Looks like utility classes for navigating the metadb.
|
| net.sourceforge.seqware.common.metadata |
Critical classes that effectively convert API calls into actions against the DB and web service.
|
| net.sourceforge.seqware.common.model |
Hibernate model classes for the metadb.
|
| net.sourceforge.seqware.common.model.lists |
Looks like various container classes for XML serialization.
|
| net.sourceforge.solexatools.util |
Portal stuff, to be assessed.
|
| net.sourceforge.solexatools.validation |
Portal stuff, to be assessed.
|
| net.sourceforge.solexatools.webapp.controller |
Portal stuff, to be assessed.
|
| Modifier and Type | Method and Description |
|---|---|
Study |
StudyService.findByID(Integer expID)
findByID.
|
Study |
StudyService.findBySWAccession(Integer swAccession)
findBySWAccession.
|
Study |
StudyService.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyService.updateDetached(Study study)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyService.findByCriteria(String criteria)
findByCriteria.
|
List<Study> |
StudyService.findByCriteria(String criteria,
boolean isCaseSens)
findByCriteria.
|
List<Study> |
StudyService.findByOwnerID(Integer registrationId)
findByOwnerID.
|
List<Study> |
StudyService.findByTitle(String title)
findByTitle.
|
List<Study> |
StudyService.list()
list.
|
List<Study> |
StudyService.list(Registration registration)
list.
|
List<Study> |
StudyService.list(Registration registration,
Boolean isAcs)
list.
|
List<Study> |
StudyService.listMyShared(Registration registration,
Boolean isAcs)
listMyShared.
|
List<Study> |
StudyService.listSharedWithMe(Registration registration)
listSharedWithMe.
|
List<Study> |
StudyService.listSharedWithMe(Registration registration,
Boolean isAcs)
listSharedWithMe.
|
List<Study> |
StudyService.listStudyHasFile(Registration registration,
String metaType,
Boolean isAcs)
listStudyHasFile.
|
List<Study> |
StudyService.listWithHasFile(List<Study> list)
listWithHasFile.
|
List<Study> |
StudyService.listWithHasFile(List<Study> list,
String metaType)
listWithHasFile.
|
| Modifier and Type | Method and Description |
|---|---|
int |
FileReportService.countOfRows(Study study)
countOfRows.
|
int |
SampleReportService.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportService.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
void |
StudyService.delete(Study study,
boolean deleteRealFiles)
delete.
|
List<IUS> |
IUSService.findBelongsToStudy(Study study)
findBelongsToStudy.
|
ProcessingStudies |
ProcessingStudiesService.findByProcessingStudy(Processing processing,
Study study)
findByProcessingStudy.
|
List<Sample> |
SampleReportService.getChildSamples(Study study)
getChildSamples.
|
int |
StudyService.getFailedCount(Study study)
getFailedCount.
|
int |
StudyService.getFinishedCount(Study study)
getFinishedCount.
|
List<FileReportRow> |
FileReportService.getReportForStudy(Study study)
getReportForStudy.
|
List<FileReportRow> |
FileReportService.getReportForStudy(Study study,
String orderField,
String sortOrder,
int offset,
int limit)
getReportForStudy.
|
List<Sample> |
SampleService.getRootSamples(Study study)
getRootSamples.
|
int |
StudyService.getRunningCount(Study study)
getRunningCount.
|
SampleReportService.Status |
SampleReportService.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportService.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
List<SampleReportService.Status> |
SampleReportService.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportService.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
List<Workflow> |
SampleReportService.getWorkflowsForStudy(Study study)
getWorkflowsForStudy.
|
Integer |
StudyService.insert(Registration registration,
Study study)
insert.
|
Integer |
StudyService.insert(Study study)
insert.
|
List<Experiment> |
ExperimentService.list(Study study)
list.
|
void |
StudyService.merge(Study study)
merge.
|
void |
StudyService.update(Registration registration,
Study study)
update.
|
void |
StudyService.update(Study study)
update.
|
Study |
StudyService.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyService.updateDetached(Study study)
updateDetached.
|
void |
FileUploadService.uploadFile(Study study,
UploadFile uploadFile,
FileType fileType,
Registration registration)
uploadFile.
|
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyService.listWithHasFile(List<Study> list)
listWithHasFile.
|
List<Study> |
StudyService.listWithHasFile(List<Study> list,
String metaType)
listWithHasFile.
|
| Modifier and Type | Method and Description |
|---|---|
Study |
StudyServiceImpl.findByID(Integer studyID)
findByID.
|
Study |
StudyServiceImpl.findBySWAccession(Integer swAccession)
findBySWAccession.
|
Study |
StudyServiceImpl.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyServiceImpl.updateDetached(Study study)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyServiceImpl.findByCriteria(String criteria)
findByCriteria.
|
List<Study> |
StudyServiceImpl.findByCriteria(String criteria,
boolean isCaseSens)
findByCriteria.
|
List<Study> |
StudyServiceImpl.findByOwnerID(Integer registrationId)
findByOwnerID.
|
List<Study> |
StudyServiceImpl.findByTitle(String title)
findByTitle.
|
List<Study> |
StudyServiceImpl.list()
list.
|
List<Study> |
StudyServiceImpl.list(Registration registration)
list.
|
List<Study> |
StudyServiceImpl.list(Registration registration,
Boolean isAcs)
list.
|
List<Study> |
StudyServiceImpl.listMyShared(Registration registration,
Boolean isAcs)
listMyShared.
|
List<Study> |
StudyServiceImpl.listSharedWithMe(Registration registration)
listSharedWithMe.
|
List<Study> |
StudyServiceImpl.listSharedWithMe(Registration registration,
Boolean isAcs)
listSharedWithMe.
|
List<Study> |
StudyServiceImpl.listStudyHasFile(Registration registration,
String metaType,
Boolean isAsc)
listStudyHasFile.
|
List<Study> |
StudyServiceImpl.listWithHasFile(List<Study> list)
listWithHasFile.
|
List<Study> |
StudyServiceImpl.listWithHasFile(List<Study> list,
String metaType)
listWithHasFile.
|
| Modifier and Type | Method and Description |
|---|---|
int |
FileReportServiceImpl.countOfRows(Study study)
countOfRows.
|
int |
SampleReportServiceImpl.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportServiceImpl.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
void |
StudyServiceImpl.delete(Study study,
boolean deleteRealFiles)
delete.
|
List<IUS> |
IUSServiceImpl.findBelongsToStudy(Study study)
findBelongsToStudy.
|
ProcessingStudies |
ProcessingStudiesServiceImpl.findByProcessingStudy(Processing processing,
Study study)
findByProcessingStudy.
|
List<Sample> |
SampleReportServiceImpl.getChildSamples(Study study)
getChildSamples.
|
int |
StudyServiceImpl.getFailedCount(Study study)
getFailedCount.
|
int |
StudyServiceImpl.getFinishedCount(Study study)
getFinishedCount.
|
List<FileReportRow> |
FileReportServiceImpl.getReportForStudy(Study study)
getReportForStudy.
|
List<FileReportRow> |
FileReportServiceImpl.getReportForStudy(Study study,
String orderField,
String sortOrder,
int offset,
int limit)
getReportForStudy.
|
List<Sample> |
SampleServiceImpl.getRootSamples(Study study)
getRootSamples.
|
int |
StudyServiceImpl.getRunningCount(Study study)
getRunningCount.
|
SampleReportService.Status |
SampleReportServiceImpl.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportServiceImpl.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
List<SampleReportService.Status> |
SampleReportServiceImpl.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportServiceImpl.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
List<Workflow> |
SampleReportServiceImpl.getWorkflowsForStudy(Study study)
getWorkflowsForStudy.
|
Integer |
StudyServiceImpl.insert(Registration registration,
Study study)
insert.
|
Integer |
StudyServiceImpl.insert(Study study)
insert.
|
List<Experiment> |
ExperimentServiceImpl.list(Study study)
list.
|
void |
StudyServiceImpl.merge(Study study)
merge.
|
void |
StudyServiceImpl.update(Registration registration,
Study study)
update.
|
void |
StudyServiceImpl.update(Study study)
update.
|
Study |
StudyServiceImpl.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyServiceImpl.updateDetached(Study study)
updateDetached.
|
void |
FileUploadServiceImpl.uploadFile(Study study,
UploadFile uploadFile,
FileType fileType,
Registration registration)
uploadFile.
|
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyServiceImpl.listWithHasFile(List<Study> list)
listWithHasFile.
|
List<Study> |
StudyServiceImpl.listWithHasFile(List<Study> list,
String metaType)
listWithHasFile.
|
| Modifier and Type | Method and Description |
|---|---|
Study |
StudyDAO.findByID(Integer studyID)
findByID.
|
Study |
StudyDAO.findBySWAccession(Integer swAccession)
findBySWAccession.
|
Study |
StudyDAO.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyDAO.updateDetached(Study study)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyDAO.findByCriteria(String criteria)
findByCriteria.
|
List<Study> |
StudyDAO.findByCriteria(String criteria,
boolean isCaseSens)
findByCriteria.
|
List<Study> |
StudyDAO.findByOwnerID(Integer registrationId)
findByOwnerID.
|
List<Study> |
StudyDAO.findByTitle(String title)
findByTitle.
|
List<Study> |
StudyDAO.list()
list.
|
List<Study> |
StudyDAO.list(Registration registration,
Boolean isAcs)
list.
|
List<Study> |
StudyDAO.listMyShared(Registration registration,
Boolean isAcs)
listMyShared.
|
List<Study> |
StudyDAO.listSharedWithMe(Registration registration,
Boolean isAcs)
listSharedWithMe.
|
List<Study> |
StudyDAO.listStudyHasFile(Registration registration,
String metaType,
Boolean iaAsc)
listStudyHasFile.
|
| Modifier and Type | Method and Description |
|---|---|
int |
FileReportDAO.countOfRows(Study study)
countOfRows.
|
int |
SampleReportDAO.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAO.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
void |
StudyDAO.delete(Study study)
delete.
|
List<StudyAttribute> |
StudyAttributeDAO.findAll(Study study)
findAll.
|
List<IUS> |
IUSDAO.findBelongsToStudy(Study study)
findBelongsToStudy.
|
ProcessingStudies |
ProcessingStudiesDAO.findByProcessingStudy(Processing processing,
Study study)
findByProcessingStudy.
|
List<Sample> |
SampleReportDAO.getChildSamples(Study study)
getChildSamples.
|
List<FileReportRow> |
FileReportDAO.getReportForStudy(Study study)
getReportForStudy.
|
List<FileReportRow> |
FileReportDAO.getReportForStudy(Study study,
String orderField,
String sortOrder,
int offset,
int limit)
getReportForStudy.
|
List<Sample> |
SampleDAO.getRootSamples(Study study)
getRootSamples.
|
SampleReportService.Status |
SampleReportDAO.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportDAO.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
int |
StudyDAO.getStatusCount(Study study,
WorkflowRunStatus status)
Count the number of workflow runs with the given status, under the given study
|
List<SampleReportService.Status> |
SampleReportDAO.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportDAO.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
List<Workflow> |
SampleReportDAO.getWorkflowsForStudy(Study study)
getWorkflowsForStudy.
|
Integer |
StudyDAO.insert(Registration registration,
Study sequencerRun)
insert.
|
Integer |
StudyDAO.insert(Study sequencerRun)
insert.
|
List<Experiment> |
ExperimentDAO.list(Study study)
list.
|
void |
StudyDAO.merge(Study study)
merge.
|
void |
StudyDAO.update(Registration registration,
Study study)
update.
|
void |
StudyDAO.update(Study sequencerRun)
update.
|
Study |
StudyDAO.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyDAO.updateDetached(Study study)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
Study |
StudyDAOHibernate.findByID(Integer expID)
findByID.
|
Study |
StudyDAOHibernate.findBySWAccession(Integer swAccession)
findBySWAccession.
|
Study |
StudyDAOHibernate.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyDAOHibernate.updateDetached(Study study)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyDAOHibernate.findByCriteria(String criteria)
findByCriteria.
|
List<Study> |
StudyDAOHibernate.findByCriteria(String criteria,
boolean isCaseSens)
findByCriteria.
|
List<Study> |
StudyDAOHibernate.findByOwnerID(Integer registrationId)
findByOwnerID.
|
List<Study> |
StudyDAOHibernate.findByTitle(String title)
findByTitle.
|
List<Study> |
StudyDAOHibernate.list()
list.
|
List<Study> |
StudyDAOHibernate.list(Registration registration,
Boolean isAsc)
list.
|
List<Study> |
StudyDAOHibernate.listMyShared(Registration registration,
Boolean isAsc)
listMyShared.
|
List<Study> |
StudyDAOHibernate.listSharedWithMe(Registration registration,
Boolean isAsc)
listSharedWithMe.
|
List<Study> |
StudyDAOHibernate.listStudyHasFile(Registration registration,
String metaType,
Boolean isAsc)
listStudyHasFile.
|
| Modifier and Type | Method and Description |
|---|---|
int |
FileReportDAOHibernate.countOfRows(Study study)
countOfRows.
|
int |
SampleReportDAOHibernate.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAOHibernate.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
void |
StudyDAOHibernate.delete(Study study)
delete.
|
List<StudyAttribute> |
StudyAttributeDAOHibernate.findAll(Study study)
findAll.
|
List<IUS> |
IUSDAOHibernate.findBelongsToStudy(Study study)
findBelongsToStudy.
|
ProcessingStudies |
ProcessingStudiesDAOHibernate.findByProcessingStudy(Processing processing,
Study study)
findByProcessingStudy.
|
List<Sample> |
SampleReportDAOHibernate.getChildSamples(Study study)
getChildSamples.
|
List<FileReportRow> |
FileReportDAOHibernate.getReportForStudy(Study study)
getReportForStudy.
|
List<FileReportRow> |
FileReportDAOHibernate.getReportForStudy(Study study,
String orderField,
String sortOrder,
int offset,
int limit)
getReportForStudy.
|
List<Sample> |
SampleDAOHibernate.getRootSamples(Study study)
getRootSamples.
|
SampleReportService.Status |
SampleReportDAOHibernate.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportDAOHibernate.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
int |
StudyDAOHibernate.getStatusCount(Study study,
WorkflowRunStatus status)
Count the number of workflow runs with the given status, under the given study
|
List<SampleReportService.Status> |
SampleReportDAOHibernate.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportDAOHibernate.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
List<Workflow> |
SampleReportDAOHibernate.getWorkflowsForStudy(Study study)
getWorkflowsForStudy.
|
Integer |
StudyDAOHibernate.insert(Registration registration,
Study study)
insert.
|
Integer |
StudyDAOHibernate.insert(Study study)
insert.
|
List<Experiment> |
ExperimentDAOHibernate.list(Study study)
list.
|
void |
StudyDAOHibernate.merge(Study study)
merge.
|
void |
StudyDAOHibernate.update(Registration registration,
Study study)
update.
|
void |
StudyDAOHibernate.update(Study study)
update.
|
Study |
StudyDAOHibernate.updateDetached(Registration registration,
Study study)
updateDetached.
|
Study |
StudyDAOHibernate.updateDetached(Study study)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
void |
PropagateOwnership.filesFromStudy(Study study)
filesFromStudy.
|
| Modifier and Type | Method and Description |
|---|---|
Study |
MetadataWS.LowLevel.existsStudy(String searchString) |
Study |
MetadataWS.getStudy(int swAccession) |
Study |
Metadata.getStudy(int swAccession)
Get study by swa
|
Study |
MetadataNoConnection.getStudy(int swAccession) |
Study |
MetadataDB.getStudy(int swAccession) |
Study |
MetadataInMemory.getStudy(int swAccession) |
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
MetadataWS.getAllStudies()
getAllStudies.
|
List<Study> |
Metadata.getAllStudies()
getAllStudies.
|
List<Study> |
MetadataNoConnection.getAllStudies()
getAllStudies.
|
List<Study> |
MetadataDB.getAllStudies()
getAllStudies.
|
List<Study> |
MetadataInMemory.getAllStudies() |
List<Study> |
MetadataWS.getStudyByName(String name) |
List<Study> |
Metadata.getStudyByName(String name) |
List<Study> |
MetadataNoConnection.getStudyByName(String name) |
List<Study> |
MetadataDB.getStudyByName(String name) |
List<Study> |
MetadataInMemory.getStudyByName(String name) |
| Modifier and Type | Method and Description |
|---|---|
Study |
ProcessingStudies.getStudy()
Getter for the field
study. |
Study |
SampleReportRow.getStudy()
Getter for the field
study. |
Study |
Experiment.getStudy()
Getter for the field
study. |
Study |
FileReportRow.getStudy()
Getter for the field
study. |
Study |
StudyAttribute.getStudy()
Getter for the field
study. |
Study |
SequencerRunReportId.getStudy()
Getter for the field
study. |
| Modifier and Type | Method and Description |
|---|---|
Set<Study> |
Processing.getStudies()
Getter for the field
studies. |
| Modifier and Type | Method and Description |
|---|---|
int |
Study.compareTo(Study that)
compareTo.
|
void |
StudyAttribute.setAttributeParent(Study parent) |
void |
ProcessingStudies.setStudy(Study study)
Setter for the field
study. |
void |
SampleReportRow.setStudy(Study study)
Setter for the field
study. |
void |
Experiment.setStudy(Study study)
Setter for the field
study. |
void |
FileReportRow.setStudy(Study study)
Setter for the field
study. |
void |
StudyAttribute.setStudy(Study study)
Setter for the field
study. |
void |
SequencerRunReportId.setStudy(Study study)
Setter for the field
study. |
| Modifier and Type | Method and Description |
|---|---|
void |
Processing.setStudies(Set<Study> studies)
Setter for the field
studies. |
| Constructor and Description |
|---|
ProcessingStudies(int processingStudiesId,
Processing processing,
Study study)
Constructor for ProcessingStudies.
|
ProcessingStudies(int processingStudiesId,
Processing processing,
Study study,
String description,
String label,
String url,
Integer swAccession)
Constructor for ProcessingStudies.
|
StudyAttribute(int studyAttributeId,
Study study,
String tag,
String value)
Constructor for StudyAttribute.
|
StudyAttribute(int studyAttributeId,
Study study,
String tag,
String value,
String units)
Constructor for StudyAttribute.
|
| Modifier and Type | Field and Description |
|---|---|
protected List<Study> |
StudyList.tList |
| Modifier and Type | Method and Description |
|---|---|
List<Study> |
StudyList.getList()
getList.
|
| Modifier and Type | Method and Description |
|---|---|
void |
StudyList.add(Study ex)
add.
|
| Modifier and Type | Method and Description |
|---|---|
void |
StudyList.setList(List<Study> list)
setList.
|
| Modifier and Type | Method and Description |
|---|---|
static Study |
FindRootUtil.getStudy(Experiment experiment)
getStudy.
|
static Study |
FindRootUtil.getStudy(Lane lane)
getStudy.
|
static Study |
FindRootUtil.getStudy(Processing processing)
getStudy.
|
static Study |
FindRootUtil.getStudy(Sample sample)
getStudy.
|
| Modifier and Type | Method and Description |
|---|---|
static List<Study> |
BulkUtil.selectStudyNode(List<String> selectedIds,
List<Study> studies)
selectStudyNode.
|
| Modifier and Type | Method and Description |
|---|---|
static String |
TreeNodeHtmlUtil.getAllHtml(Study study,
Registration registration,
String treeType)
getAllHtml.
|
static int |
PaginationUtil.getPageNumber(javax.servlet.http.HttpServletRequest request,
Study requiredStudy,
List<Study> allList)
getPageNumber.
|
static String |
TreeNodeHtmlUtil.getStydyHtml(Study study,
Registration registration,
Integer openingNodeId,
String treeType)
getStydyHtml.
|
static String |
NodeHtmlUtil.getStydyHtml(Study study,
Registration registration,
String openingNodeId,
boolean isOpenProc,
String treeType)
getStydyHtml.
|
static SortedSet<Experiment> |
BulkUtil.selectExperimentNode(List<String> selectedIds,
Study study)
selectExperimentNode.
|
| Modifier and Type | Method and Description |
|---|---|
static int |
PaginationUtil.getPageNumber(javax.servlet.http.HttpServletRequest request,
Study requiredStudy,
List<Study> allList)
getPageNumber.
|
static List<Study> |
BulkUtil.selectStudyNode(List<String> selectedIds,
List<Study> studies)
selectStudyNode.
|
| Modifier and Type | Method and Description |
|---|---|
void |
StudyUpdateValidator.validateTitle(Study study,
org.springframework.validation.Errors errors) |
void |
StudyValidator.validateTitle(Study study,
org.springframework.validation.Errors errors)
Determines if the experiment's email address and confirm email address match.
|
| Modifier and Type | Method and Description |
|---|---|
org.springframework.web.servlet.ModelAndView |
StudyController.handleCancel(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to cancel the study or the study update page.
|
org.springframework.web.servlet.ModelAndView |
UploadFileController.handleCancel(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to cancel the study or the study update page.
|
org.springframework.web.servlet.ModelAndView |
ExperimentController.handleCancel(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to cancel the study or the study update page.
|
org.springframework.web.servlet.ModelAndView |
UploadSequenceController.handleCancel(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to cancel the study or the study update page.
|
org.springframework.web.servlet.ModelAndView |
StudyController.handleDelete(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to delete their study.
|
org.springframework.web.servlet.ModelAndView |
ExperimentController.handleDelete(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to delete their experiment.
|
org.springframework.web.servlet.ModelAndView |
StudyController.handleReset(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to reset the study page during a new or update study.
|
org.springframework.web.servlet.ModelAndView |
StudyController.handleShare(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to share their study.
|
org.springframework.web.servlet.ModelAndView |
WorkflowController.handleShare(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to share their study.
|
org.springframework.web.servlet.ModelAndView |
StudyController.handleSubmit(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to submit a new study.
|
org.springframework.web.servlet.ModelAndView |
StudyController.handleUpdate(javax.servlet.http.HttpServletRequest request,
javax.servlet.http.HttpServletResponse response,
Study command)
Handles the user's request to update their study.
|
Copyright © 2015 SeqWare. All rights reserved.