IUSDAOHibernate (SeqWare 1.1.2 API)

java.lang.Object
- org.springframework.dao.support.DaoSupport
- - org.springframework.orm.hibernate3.support.HibernateDaoSupport
  - - net.sourceforge.seqware.common.dao.hibernate.IUSDAOHibernate

All Implemented Interfaces:

IUSDAO, org.springframework.beans.factory.InitializingBean
```
public class IUSDAOHibernate
extends org.springframework.orm.hibernate3.support.HibernateDaoSupport
implements IUSDAO
```
IUSDAOHibernate class.

Version:

$Id: $Id

Author:

boconnor

Field Summary
- Fields inherited from class org.springframework.dao.support.DaoSupport
  logger

Constructor Summary

Constructors
Constructor and Description

IUSDAOHibernate()
Constructor for IUSDAOHibernate.

Constructors
Constructor and Description
`IUSDAOHibernate()` Constructor for IUSDAOHibernate.

Method Summary

Methods
Modifier and Type	Method and Description
`void`	`delete(IUS obj)` delete.
`List<IUS>`	`find(String sequencerRunName, Integer lane, String sampleName)` find.
`List<IUS>`	`findBelongsToStudy(Study study)` findBelongsToStudy.
`List<IUS>`	`findByCriteria(String criteria, boolean isCaseSens)` findByCriteria.
`IUS`	`findByID(Integer id)` findByID.
`List<IUS>`	`findByOwnerID(Integer registrationId)` findByOwnerID.
`IUS`	`findBySWAccession(Integer swAccession)` findBySWAccession.
`List<File>`	`getFiles(Integer iusId)` getFiles.
`List<File>`	`getFiles(Integer iusId, String metaType)` getFiles.
`Integer`	`insert(IUS obj)` insert.
`Integer`	`insert(Registration registration, IUS obj)` insert.
`boolean`	`isHasFile(Integer iusId)` isHasFile.
`boolean`	`isHasFile(Integer iusId, String metaType)` isHasFile.
`List<IUS>`	`list()` list.
`void`	`update(IUS obj)` update.
`void`	`update(Registration registration, IUS ius)` update.
`IUS`	`updateDetached(IUS ius)` updateDetached.
`IUS`	`updateDetached(Registration registration, IUS ius)` updateDetached.

Methods inherited from class org.springframework.orm.hibernate3.support.HibernateDaoSupport
checkDaoConfig, convertHibernateAccessException, createHibernateTemplate, getHibernateTemplate, getSession, getSession, getSessionFactory, releaseSession, setHibernateTemplate, setSessionFactory

Methods inherited from class org.springframework.dao.support.DaoSupport
afterPropertiesSet, initDao

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - IUSDAOHibernate
```
public IUSDAOHibernate()
```
    Constructor for IUSDAOHibernate.
- Method Detail
  - insert
```
public Integer insert(IUS obj)
```
    insert.
    Inserts an instance of Lane into the database.
    
    Specified by:
    
    insert in interface IUSDAO
    
    Parameters:
    obj - a IUS object.
    
    Returns:
  - update
```
public void update(IUS obj)
```
    update.
    Updates an instance of Lane in the database.
    
    Specified by:
    
    update in interface IUSDAO
    
    Parameters:
    obj - a IUS object.
  - delete
```
public void delete(IUS obj)
```
    delete.
    
    Specified by:
    
    delete in interface IUSDAO
    
    Parameters:
    obj - a IUS object.
  - getFiles
```
public List<File> getFiles(Integer iusId)
```
    getFiles.
    
    Specified by:
    
    getFiles in interface IUSDAO
    
    Parameters:
    iusId - a Integer object.
    
    Returns:
    a List object.
  - isHasFile
```
public boolean isHasFile(Integer iusId)
```
    isHasFile.
    
    Specified by:
    
    isHasFile in interface IUSDAO
    
    Parameters:
    iusId - a Integer object.
    
    Returns:
    a boolean.
  - getFiles
```
public List<File> getFiles(Integer iusId,
                  String metaType)
```
    getFiles.
    
    Specified by:
    
    getFiles in interface IUSDAO
    
    Parameters:
    iusId - a Integer object.
    metaType - a String object.
    
    Returns:
    a List object.
  - isHasFile
```
public boolean isHasFile(Integer iusId,
                String metaType)
```
    isHasFile.
    
    Specified by:
    
    isHasFile in interface IUSDAO
    
    Parameters:
    iusId - a Integer object.
    metaType - a String object.
    
    Returns:
    a boolean.
  - findByID
```
public IUS findByID(Integer id)
```
    findByID.
    
    Specified by:
    
    findByID in interface IUSDAO
    
    Parameters:
    id - a Integer object.
    
    Returns:
    a IUS object.
  - findByOwnerID
```
public List<IUS> findByOwnerID(Integer registrationId)
```
    findByOwnerID.
    
    Specified by:
    
    findByOwnerID in interface IUSDAO
    
    Parameters:
    registrationId - a Integer object.
    
    Returns:
    a List object.
  - findBySWAccession
```
public IUS findBySWAccession(Integer swAccession)
```
    findBySWAccession.
    
    Specified by:
    
    findBySWAccession in interface IUSDAO
    
    Parameters:
    swAccession - a Integer object.
    
    Returns:
    a IUS object.
  - findByCriteria
```
public List<IUS> findByCriteria(String criteria,
                       boolean isCaseSens)
```
    findByCriteria.
    
    Specified by:
    
    findByCriteria in interface IUSDAO
    
    Parameters:
    criteria - a String object.
    isCaseSens - a boolean.
    
    Returns:
    a List object.
  - updateDetached
```
public IUS updateDetached(IUS ius)
```
    updateDetached.
    
    Specified by:
    
    updateDetached in interface IUSDAO
    
    Parameters:
    ius - a IUS object.
    
    Returns:
    a IUS object.
  - findBelongsToStudy
```
public List<IUS> findBelongsToStudy(Study study)
```
    findBelongsToStudy.
    
    Specified by:
    
    findBelongsToStudy in interface IUSDAO
    
    Parameters:
    study - a Study object.
    
    Returns:
    a List object.
  - list
```
public List<IUS> list()
```
    list.
    
    Specified by:
    
    list in interface IUSDAO
    
    Returns:
    a List object.
  - update
```
public void update(Registration registration,
          IUS ius)
```
    update.
    
    Specified by:
    
    update in interface IUSDAO
    
    Parameters:
    registration - a Registration object.
    ius - a IUS object.
  - insert
```
public Integer insert(Registration registration,
             IUS obj)
```
    insert.
    
    Specified by:
    
    insert in interface IUSDAO
    
    Parameters:
    registration - a Registration object.
    obj - a IUS object.
    
    Returns:
  - updateDetached
```
public IUS updateDetached(Registration registration,
                 IUS ius)
```
    updateDetached.
    
    Specified by:
    
    updateDetached in interface IUSDAO
    
    Parameters:
    registration - a Registration object.
    ius - a IUS object.
    
    Returns:
    a IUS object.
  - find
```
public List<IUS> find(String sequencerRunName,
             Integer lane,
             String sampleName)
```
    find.
    
    Specified by:
    
    find in interface IUSDAO
    
    Parameters:
    sequencerRunName - a String object.
    lane - a Integer object.
    sampleName - a String object.
    
    Returns:
    a List object.

Class IUSDAOHibernate

Field Summary

Fields inherited from class org.springframework.dao.support.DaoSupport

Constructor Summary

Method Summary

Methods inherited from class org.springframework.orm.hibernate3.support.HibernateDaoSupport

Methods inherited from class org.springframework.dao.support.DaoSupport

Methods inherited from class java.lang.Object

Constructor Detail

IUSDAOHibernate

Method Detail

insert

update

delete

getFiles

isHasFile

getFiles

isHasFile

findByID

findByOwnerID

findBySWAccession

findByCriteria

updateDetached

findBelongsToStudy

list

update

insert

updateDetached

find