IUS (SeqWare 1.1.2 API)

java.lang.Object
- net.sourceforge.seqware.common.security.PermissionsAware
- - net.sourceforge.seqware.common.model.IUS

All Implemented Interfaces:: Serializable, Comparable<IUS>, Annotatable<IUSAttribute>, FirstTierModel, ParentAccessionModel

public class IUS
extends PermissionsAware
implements Serializable, Comparable<IUS>, ParentAccessionModel, Annotatable<IUSAttribute>, FirstTierModel

See Also:: Serialized Form

Constructor Summary

Constructors
Constructor and Description

IUS()
Constructor for IUS.

Constructors
Constructor and Description
`IUS()` Constructor for IUS.

Method Summary

Methods
Modifier and Type	Method and Description
`int`	`compareTo(IUS that)`
`boolean`	`equals(Object other)`
`String`	`getAlias()` Getter for the field `alias`.
`Set<IUSAttribute>`	`getAnnotations()` Get the annotations for this model
`Date`	`getCreateTimestamp()` Getter for the field `createTimestamp`.
`String`	`getDescription()` Getter for the field `description`.
`Boolean`	`getIsHasFile()` Getter for the field `isHasFile`.
`Boolean`	`getIsSelected()` Getter for the field `isSelected`.
`Set<IUSAttribute>`	`getIusAttributes()` Getter for the field `iusAttributes`.
`Integer`	`getIusId()` Getter for the field `iusId`.
`String`	`getJsonEscapeDescription()` getJsonEscapeDescription.
`String`	`getJsonEscapeName()` getJsonEscapeName.
`Lane`	`getLane()` Getter for the field `lane`.
`String`	`getName()` Getter for the field `name`.
`Registration`	`getOwner()` Getter for the field `owner`.
`Set<Processing>`	`getProcessings()` Getter for the field `processings`.
`Sample`	`getSample()` Getter for the field `sample`.
`Boolean`	`getSkip()` Getter for the field `skip`.
`Integer`	`getSwAccession()` Getter for the field `swAccession`.
`String`	`getTag()` Getter for the field `tag`.
`Date`	`getUpdateTimestamp()` Getter for the field `updateTimestamp`.
`Set<WorkflowRun>`	`getWorkflowRuns()` Getter for the field `workflowRuns`.
`boolean`	`givesPermissionInternal(Registration registration, Set<Integer> considered)` Short-circuit permission checking by providing a set of entities that have already been checked
`int`	`hashCode()`
`void`	`setAlias(String alias)` Setter for the field `alias`.
`void`	`setCreateTimestamp(Date createTimestamp)` Setter for the field `createTimestamp`.
`void`	`setDescription(String description)` Setter for the field `description`.
`void`	`setIsHasFile(Boolean isHasFile)` Setter for the field `isHasFile`.
`void`	`setIsSelected(Boolean isSelected)` Setter for the field `isSelected`.
`void`	`setIusAttributes(Set<IUSAttribute> iusAttributes)` Setter for the field `iusAttributes`.
`void`	`setIusId(Integer iusId)` Setter for the field `iusId`.
`void`	`setLane(Lane lane)` Setter for the field `lane`.
`void`	`setName(String name)` Setter for the field `name`.
`void`	`setOwner(Registration owner)` Setter for the field `owner`.
`void`	`setProcessings(Set<Processing> processings)` Setter for the field `processings`.
`void`	`setSample(Sample sample)` Setter for the field `sample`.
`void`	`setSkip(Boolean skip)` Setter for the field `skip`.
`void`	`setSwAccession(Integer swAccession)` Setter for the field `swAccession`.
`void`	`setTag(String tag)` Setter for the field `tag`.
`void`	`setUpdateTimestamp(Date updateTimestamp)` Setter for the field `updateTimestamp`.
`void`	`setWorkflowRuns(Set<WorkflowRun> workflowRuns)` Setter for the field `workflowRuns`.
`String`	`toString()`

Methods inherited from class net.sourceforge.seqware.common.security.PermissionsAware
givesPermission, givesPermission

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - IUS
```
public IUS()
```
    Constructor for IUS.
- Method Detail
  - compareTo
```
public int compareTo(IUS that)
```
    Specified by:
    
    compareTo in interface Comparable<IUS>
    
    Parameters:
    that -
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - equals
```
public boolean equals(Object other)
```
    Overrides:
    
    equals in class Object
    
    Parameters:
    other -
  - hashCode
```
public int hashCode()
```
    Overrides:
    
    hashCode in class Object
  - getOwner
```
public Registration getOwner()
```
    Getter for the field owner.
    
    Returns:
    a Registration object.
  - setOwner
```
public void setOwner(Registration owner)
```
    Setter for the field owner.
    
    Parameters:
    owner - a Registration object.
  - getIusId
```
public Integer getIusId()
```
    Getter for the field iusId.
    
    Returns:
    a Integer object.
  - setIusId
```
public void setIusId(Integer iusId)
```
    Setter for the field iusId.
    
    Parameters:
    iusId - a Integer object.
  - getLane
```
public Lane getLane()
```
    Getter for the field lane.
    
    Returns:
    a Lane object.
  - setLane
```
public void setLane(Lane lane)
```
    Setter for the field lane.
    
    Parameters:
    lane - a Lane object.
  - getSample
```
public Sample getSample()
```
    Getter for the field sample.
    
    Returns:
    a Sample object.
  - setSample
```
public void setSample(Sample sample)
```
    Setter for the field sample.
    
    Parameters:
    sample - a Sample object.
  - getJsonEscapeName
```
public String getJsonEscapeName()
```
    getJsonEscapeName.
    
    Returns:
    a String object.
  - getName
```
public String getName()
```
    Getter for the field name.
    
    Returns:
    a String object.
  - setName
```
public void setName(String name)
```
    Setter for the field name.
    
    Parameters:
    name - a String object.
  - getAlias
```
public String getAlias()
```
    Getter for the field alias.
    
    Returns:
    a String object.
  - setAlias
```
public void setAlias(String alias)
```
    Setter for the field alias.
    
    Parameters:
    alias - a String object.
  - getJsonEscapeDescription
```
public String getJsonEscapeDescription()
```
    getJsonEscapeDescription.
    
    Returns:
    a String object.
  - getDescription
```
public String getDescription()
```
    Getter for the field description.
    
    Returns:
    a String object.
  - setDescription
```
public void setDescription(String description)
```
    Setter for the field description.
    
    Parameters:
    description - a String object.
  - getTag
```
public String getTag()
```
    Getter for the field tag.
    
    Returns:
    a String object.
  - setTag
```
public void setTag(String tag)
```
    Setter for the field tag.
    
    Parameters:
    tag - a String object.
  - getSwAccession
```
public Integer getSwAccession()
```
    Getter for the field swAccession.
    
    Specified by:
    
    getSwAccession in interface FirstTierModel
    
    Returns:
    a Integer object.
  - setSwAccession
```
public void setSwAccession(Integer swAccession)
```
    Setter for the field swAccession.
    
    Parameters:
    swAccession - a Integer object.
  - getCreateTimestamp
```
public Date getCreateTimestamp()
```
    Getter for the field createTimestamp.
    
    Returns:
    a Date object.
  - setCreateTimestamp
```
public void setCreateTimestamp(Date createTimestamp)
```
    Setter for the field createTimestamp.
    
    Parameters:
    createTimestamp - a Date object.
  - getUpdateTimestamp
```
public Date getUpdateTimestamp()
```
    Getter for the field updateTimestamp.
    
    Returns:
    a Date object.
  - setUpdateTimestamp
```
public void setUpdateTimestamp(Date updateTimestamp)
```
    Setter for the field updateTimestamp.
    
    Parameters:
    updateTimestamp - a Date object.
  - getProcessings
```
public Set<Processing> getProcessings()
```
    Getter for the field processings.
    
    Returns:
    a Set object.
  - setProcessings
```
public void setProcessings(Set<Processing> processings)
```
    Setter for the field processings.
    
    Parameters:
    processings - a Set object.
  - getWorkflowRuns
```
public Set<WorkflowRun> getWorkflowRuns()
```
    Getter for the field workflowRuns.
    
    Returns:
    a Set object.
  - setWorkflowRuns
```
public void setWorkflowRuns(Set<WorkflowRun> workflowRuns)
```
    Setter for the field workflowRuns.
    
    Parameters:
    workflowRuns - a Set object.
  - getIsHasFile
```
public Boolean getIsHasFile()
```
    Getter for the field isHasFile.
    
    Returns:
    a Boolean object.
  - setIsHasFile
```
public void setIsHasFile(Boolean isHasFile)
```
    Setter for the field isHasFile.
    
    Parameters:
    isHasFile - a Boolean object.
  - getIsSelected
```
public Boolean getIsSelected()
```
    Getter for the field isSelected.
    
    Returns:
    a Boolean object.
  - setIsSelected
```
public void setIsSelected(Boolean isSelected)
```
    Setter for the field isSelected.
    
    Parameters:
    isSelected - a Boolean object.
  - getIusAttributes
```
public Set<IUSAttribute> getIusAttributes()
```
    Getter for the field iusAttributes.
    
    Returns:
    a Set object.
  - setIusAttributes
```
public void setIusAttributes(Set<IUSAttribute> iusAttributes)
```
    Setter for the field iusAttributes.
    
    Parameters:
    iusAttributes - a Set object.
  - getSkip
```
public Boolean getSkip()
```
    Getter for the field skip.
    
    Returns:
    a Boolean object.
  - setSkip
```
public void setSkip(Boolean skip)
```
    Setter for the field skip.
    
    Parameters:
    skip - a Boolean object.
  - givesPermissionInternal
```
public boolean givesPermissionInternal(Registration registration,
                              Set<Integer> considered)
```
    Description copied from class: PermissionsAware
    
    Short-circuit permission checking by providing a set of entities that have already been checked
    
    Specified by:
    
    givesPermissionInternal in class PermissionsAware
    
    Returns:
  - getAnnotations
```
public Set<IUSAttribute> getAnnotations()
```
    Description copied from interface: Annotatable
    
    Get the annotations for this model
    
    Specified by:
    
    getAnnotations in interface Annotatable<IUSAttribute>
    
    Returns:

Class IUS

Constructor Summary

Method Summary

Methods inherited from class net.sourceforge.seqware.common.security.PermissionsAware

Methods inherited from class java.lang.Object

Constructor Detail

IUS

Method Detail

compareTo

toString

equals

hashCode

getOwner

setOwner

getIusId

setIusId

getLane

setLane

getSample

setSample

getJsonEscapeName

getName

setName

getAlias

setAlias

getJsonEscapeDescription

getDescription

setDescription

getTag

setTag

getSwAccession

setSwAccession

getCreateTimestamp

setCreateTimestamp

getUpdateTimestamp

setUpdateTimestamp

getProcessings

setProcessings

getWorkflowRuns

setWorkflowRuns

getIsHasFile

setIsHasFile

getIsSelected

setIsSelected

getIusAttributes

setIusAttributes

getSkip

setSkip

givesPermissionInternal

getAnnotations