FileReportDAOHibernate (SeqWare 1.1.2 API)

java.lang.Object
- org.springframework.dao.support.DaoSupport
- - org.springframework.orm.hibernate3.support.HibernateDaoSupport
  - - net.sourceforge.seqware.common.dao.hibernate.FileReportDAOHibernate

All Implemented Interfaces:

FileReportDAO, org.springframework.beans.factory.InitializingBean
```
public class FileReportDAOHibernate
extends org.springframework.orm.hibernate3.support.HibernateDaoSupport
implements FileReportDAO
```
FileReportDAOHibernate class.

Version:

$Id: $Id

Author:

boconnor

Field Summary
- Fields inherited from class org.springframework.dao.support.DaoSupport
  logger

Constructor Summary

Constructors
Constructor and Description

FileReportDAOHibernate()

Constructors
Constructor and Description
`FileReportDAOHibernate()`

Method Summary

Methods
Modifier and Type	Method and Description
`int`	`countOfRows(SequencerRun sr)` countOfRows.
`int`	`countOfRows(Study study)` countOfRows.
`List<FileReportRow>`	`getReportForSequencerRun(SequencerRun seqRun)` getReportForSequencerRun.
`List<FileReportRow>`	`getReportForSequencerRun(SequencerRun seqRun, String orderField, String sortOrder, int offset, int limit)` getReportForSequencerRun.
`List<FileReportRow>`	`getReportForSequencerRuns(String orderField, String sortOrder, int offset, int limit)` getReportForSequencerRuns.
`List<FileReportRow>`	`getReportForStudy(Study study)` getReportForStudy.
`List<FileReportRow>`	`getReportForStudy(Study study, String orderField, String sortOrder, int offset, int limit)` getReportForStudy.

Methods inherited from class org.springframework.orm.hibernate3.support.HibernateDaoSupport
checkDaoConfig, convertHibernateAccessException, createHibernateTemplate, getHibernateTemplate, getSession, getSession, getSessionFactory, releaseSession, setHibernateTemplate, setSessionFactory

Methods inherited from class org.springframework.dao.support.DaoSupport
afterPropertiesSet, initDao

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- FileReportDAOHibernate
```
public FileReportDAOHibernate()
```

Method Detail

getReportForStudy
```
public List<FileReportRow> getReportForStudy(Study study)
```
getReportForStudy.

Specified by:

getReportForStudy in interface FileReportDAO

Parameters:
study - a Study object.

Returns:
a List object.

getReportForStudy

public List<FileReportRow> getReportForStudy(Study study,
                                    String orderField,
                                    String sortOrder,
                                    int offset,
                                    int limit)

getReportForStudy.

Specified by:: getReportForStudy in interface FileReportDAO
Parameters:: study - a Study object.; orderField - a String object.; sortOrder - a String object.; offset - a int.; limit - a int.
Returns:: a List object.

getReportForSequencerRun

public List<FileReportRow> getReportForSequencerRun(SequencerRun seqRun,
                                           String orderField,
                                           String sortOrder,
                                           int offset,
                                           int limit)

getReportForSequencerRun.

Specified by:: getReportForSequencerRun in interface FileReportDAO
Parameters:: seqRun - a SequencerRun object.; orderField - a String object.; sortOrder - a String object.; offset - a int.; limit - a int.
Returns:: a List object.

getReportForSequencerRuns

public List<FileReportRow> getReportForSequencerRuns(String orderField,
                                            String sortOrder,
                                            int offset,
                                            int limit)

getReportForSequencerRuns.

Specified by:: getReportForSequencerRuns in interface FileReportDAO
Parameters:: orderField - a String object.; sortOrder - a String object.; offset - a int.; limit - a int.
Returns:: a List object.

getReportForSequencerRun
```
public List<FileReportRow> getReportForSequencerRun(SequencerRun seqRun)
```
getReportForSequencerRun.

Specified by:

getReportForSequencerRun in interface FileReportDAO

Parameters:
seqRun - a SequencerRun object.

Returns:
a List object.

countOfRows
```
public int countOfRows(Study study)
```
countOfRows.

Specified by:

countOfRows in interface FileReportDAO

Parameters:
study - a Study object.

Returns:
a int.

countOfRows
```
public int countOfRows(SequencerRun sr)
```
countOfRows.

Specified by:

countOfRows in interface FileReportDAO

Parameters:
sr - a SequencerRun object.

Returns:
a int.

Class FileReportDAOHibernate

Field Summary

Fields inherited from class org.springframework.dao.support.DaoSupport

Constructor Summary

Method Summary

Methods inherited from class org.springframework.orm.hibernate3.support.HibernateDaoSupport

Methods inherited from class org.springframework.dao.support.DaoSupport

Methods inherited from class java.lang.Object

Constructor Detail

FileReportDAOHibernate

Method Detail

getReportForStudy

getReportForStudy

getReportForSequencerRun

getReportForSequencerRuns

getReportForSequencerRun

countOfRows

countOfRows