ExperimentSpotDesignReadSpec (SeqWare 1.1.2 API)

java.lang.Object
- net.sourceforge.seqware.common.model.ExperimentSpotDesignReadSpec

All Implemented Interfaces:

Serializable, Comparable<ExperimentSpotDesignReadSpec>, SecondTierModel
```
public class ExperimentSpotDesignReadSpec
extends Object
implements Serializable, Comparable<ExperimentSpotDesignReadSpec>, SecondTierModel
```
ExperimentSpotDesignReadSpec class.

Version:

$Id: $Id

Author:

boconnor

See Also:
Serialized Form

Constructor Summary

Constructors
Constructor and Description

ExperimentSpotDesignReadSpec()
Constructor for ExperimentSpotDesignReadSpec.

Constructors
Constructor and Description
`ExperimentSpotDesignReadSpec()` Constructor for ExperimentSpotDesignReadSpec.

Method Summary

Methods
Modifier and Type	Method and Description
`int`	`compareTo(ExperimentSpotDesignReadSpec that)`
`boolean`	`equals(Object other)`
`Integer`	`getBaseCoord()` Getter for the field `baseCoord`.
`Integer`	`getCycleCoord()` Getter for the field `cycleCoord`.
`String`	`getExpectedBaseCall()` Getter for the field `expectedBaseCall`.
`ExperimentSpotDesign`	`getExperimentSpotDesign()` Getter for the field `experimentSpotDesign`.
`Integer`	`getExperimentSpotDesignReadSpecId()` Getter for the field `experimentSpotDesignReadSpecId`.
`Integer`	`getLength()` Getter for the field `length`.
`int`	`getModelId()` Get the id for this model
`String`	`getReadClass()` Getter for the field `readClass`.
`Integer`	`getReadIndex()` Getter for the field `readIndex`.
`String`	`getReadLabel()` Getter for the field `readLabel`.
`String`	`getReadType()` Getter for the field `readType`.
`int`	`hashCode()`
`void`	`setBaseCoord(Integer baseCoord)` Setter for the field `baseCoord`.
`void`	`setCycleCoord(Integer cycleCoord)` Setter for the field `cycleCoord`.
`void`	`setExpectedBaseCall(String expectedBaseCall)` Setter for the field `expectedBaseCall`.
`void`	`setExperimentSpotDesign(ExperimentSpotDesign experimentSpotDesign)` Setter for the field `experimentSpotDesign`.
`void`	`setExperimentSpotDesignReadSpecId(Integer experimentSpotDesignReadSpecId)` Setter for the field `experimentSpotDesignReadSpecId`.
`void`	`setLength(Integer length)` Setter for the field `length`.
`void`	`setReadClass(String readClass)` Setter for the field `readClass`.
`void`	`setReadIndex(Integer readIndex)` Setter for the field `readIndex`.
`void`	`setReadLabel(String readLabel)` Setter for the field `readLabel`.
`void`	`setReadType(String readType)` Setter for the field `readType`.
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - ExperimentSpotDesignReadSpec
```
public ExperimentSpotDesignReadSpec()
```
    Constructor for ExperimentSpotDesignReadSpec.
- Method Detail
  - compareTo
```
public int compareTo(ExperimentSpotDesignReadSpec that)
```
    Specified by:
    
    compareTo in interface Comparable<ExperimentSpotDesignReadSpec>
    
    Parameters:
    that -
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - equals
```
public boolean equals(Object other)
```
    Overrides:
    
    equals in class Object
    
    Parameters:
    other -
  - hashCode
```
public int hashCode()
```
    Overrides:
    
    hashCode in class Object
  - getLength
```
public Integer getLength()
```
    Getter for the field length.
    
    Returns:
    a Integer object.
  - setLength
```
public void setLength(Integer length)
```
    Setter for the field length.
    
    Parameters:
    length - a Integer object.
  - getExperimentSpotDesignReadSpecId
```
public Integer getExperimentSpotDesignReadSpecId()
```
    Getter for the field experimentSpotDesignReadSpecId.
    
    Returns:
    a Integer object.
  - setExperimentSpotDesignReadSpecId
```
public void setExperimentSpotDesignReadSpecId(Integer experimentSpotDesignReadSpecId)
```
    Setter for the field experimentSpotDesignReadSpecId.
    
    Parameters:
    experimentSpotDesignReadSpecId - a Integer object.
  - getExperimentSpotDesign
```
public ExperimentSpotDesign getExperimentSpotDesign()
```
    Getter for the field experimentSpotDesign.
    
    Returns:
    a ExperimentSpotDesign object.
  - setExperimentSpotDesign
```
public void setExperimentSpotDesign(ExperimentSpotDesign experimentSpotDesign)
```
    Setter for the field experimentSpotDesign.
    
    Parameters:
    experimentSpotDesign - a ExperimentSpotDesign object.
  - getReadIndex
```
public Integer getReadIndex()
```
    Getter for the field readIndex.
    
    Returns:
    a Integer object.
  - setReadIndex
```
public void setReadIndex(Integer readIndex)
```
    Setter for the field readIndex.
    
    Parameters:
    readIndex - a Integer object.
  - getReadLabel
```
public String getReadLabel()
```
    Getter for the field readLabel.
    
    Returns:
    a String object.
  - setReadLabel
```
public void setReadLabel(String readLabel)
```
    Setter for the field readLabel.
    
    Parameters:
    readLabel - a String object.
  - getReadClass
```
public String getReadClass()
```
    Getter for the field readClass.
    
    Returns:
    a String object.
  - setReadClass
```
public void setReadClass(String readClass)
```
    Setter for the field readClass.
    
    Parameters:
    readClass - a String object.
  - getReadType
```
public String getReadType()
```
    Getter for the field readType.
    
    Returns:
    a String object.
  - setReadType
```
public void setReadType(String readType)
```
    Setter for the field readType.
    
    Parameters:
    readType - a String object.
  - getBaseCoord
```
public Integer getBaseCoord()
```
    Getter for the field baseCoord.
    
    Returns:
    a Integer object.
  - setBaseCoord
```
public void setBaseCoord(Integer baseCoord)
```
    Setter for the field baseCoord.
    
    Parameters:
    baseCoord - a Integer object.
  - getCycleCoord
```
public Integer getCycleCoord()
```
    Getter for the field cycleCoord.
    
    Returns:
    a Integer object.
  - setCycleCoord
```
public void setCycleCoord(Integer cycleCoord)
```
    Setter for the field cycleCoord.
    
    Parameters:
    cycleCoord - a Integer object.
  - getExpectedBaseCall
```
public String getExpectedBaseCall()
```
    Getter for the field expectedBaseCall.
    
    Returns:
    a String object.
  - setExpectedBaseCall
```
public void setExpectedBaseCall(String expectedBaseCall)
```
    Setter for the field expectedBaseCall.
    
    Parameters:
    expectedBaseCall - a String object.
  - getModelId
```
public int getModelId()
```
    Description copied from interface: SecondTierModel
    
    Get the id for this model
    
    Specified by:
    
    getModelId in interface SecondTierModel
    
    Returns:

Class ExperimentSpotDesignReadSpec

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

ExperimentSpotDesignReadSpec

Method Detail

compareTo

toString

equals

hashCode

getLength

setLength

getExperimentSpotDesignReadSpecId

setExperimentSpotDesignReadSpecId

getExperimentSpotDesign

setExperimentSpotDesign

getReadIndex

setReadIndex

getReadLabel

setReadLabel

getReadClass

setReadClass

getReadType

setReadType

getBaseCoord

setBaseCoord

getCycleCoord

setCycleCoord

getExpectedBaseCall

setExpectedBaseCall

getModelId