| Package | Description |
|---|---|
| net.sourceforge.seqware.common.business |
Looks like auto-generated classes for Hibernate.
|
| net.sourceforge.seqware.common.business.impl |
Looks like auto-generated implementation for Hibernate classes.
|
| net.sourceforge.seqware.common.dao |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.dao.hibernate |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.metadata |
Critical classes that effectively convert API calls into actions against the DB and web service.
|
| net.sourceforge.seqware.common.model |
Hibernate model classes for the metadb.
|
| net.sourceforge.seqware.common.model.comparator |
Comparator, used in Hibernate.
|
| net.sourceforge.seqware.common.model.lists |
Looks like various container classes for XML serialization.
|
| Modifier and Type | Method and Description |
|---|---|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecService.findByID(Integer expID)
findByID.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecService.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesignReadSpecService.list()
list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesignReadSpecService.delete(ExperimentSpotDesignReadSpec obj)
delete.
|
void |
ExperimentSpotDesignReadSpecService.insert(ExperimentSpotDesignReadSpec obj)
insert.
|
void |
ExperimentSpotDesignReadSpecService.update(ExperimentSpotDesignReadSpec obj)
update.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecService.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecServiceImpl.findByID(Integer id)
findByID.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecServiceImpl.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesignReadSpecServiceImpl.list()
list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesignReadSpecServiceImpl.delete(ExperimentSpotDesignReadSpec obj)
delete.
|
void |
ExperimentSpotDesignReadSpecServiceImpl.insert(ExperimentSpotDesignReadSpec obj)
insert.
|
void |
ExperimentSpotDesignReadSpecServiceImpl.update(ExperimentSpotDesignReadSpec obj)
update.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecServiceImpl.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecDAO.findByID(Integer id)
findByID.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecDAO.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesignReadSpecDAO.list()
list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesignReadSpecDAO.delete(ExperimentSpotDesignReadSpec obj)
delete.
|
void |
ExperimentSpotDesignReadSpecDAO.insert(ExperimentSpotDesignReadSpec obj)
insert.
|
void |
ExperimentSpotDesignReadSpecDAO.update(ExperimentSpotDesignReadSpec obj)
update.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecDAO.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecDAOHibernate.findByID(Integer id)
findByID.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecDAOHibernate.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesignReadSpecDAOHibernate.list()
list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesignReadSpecDAOHibernate.delete(ExperimentSpotDesignReadSpec obj)
delete.
|
void |
ExperimentSpotDesignReadSpecDAOHibernate.insert(ExperimentSpotDesignReadSpec obj)
insert.
|
void |
ExperimentSpotDesignReadSpecDAOHibernate.update(ExperimentSpotDesignReadSpec obj)
update.
|
ExperimentSpotDesignReadSpec |
ExperimentSpotDesignReadSpecDAOHibernate.updateDetached(ExperimentSpotDesignReadSpec experiment)
updateDetached.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentSpotDesignReadSpec> |
MetadataWS.getExperimentSpotDesignReadSpecs() |
List<ExperimentSpotDesignReadSpec> |
Metadata.getExperimentSpotDesignReadSpecs()
getPlatforms.
|
List<ExperimentSpotDesignReadSpec> |
MetadataNoConnection.getExperimentSpotDesignReadSpecs() |
List<ExperimentSpotDesignReadSpec> |
MetadataDB.getExperimentSpotDesignReadSpecs() |
List<ExperimentSpotDesignReadSpec> |
MetadataInMemory.getExperimentSpotDesignReadSpecs() |
| Modifier and Type | Method and Description |
|---|---|
SortedSet<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesign.getReadSpecs()
Getter for the field
readSpecs. |
| Modifier and Type | Method and Description |
|---|---|
int |
ExperimentSpotDesignReadSpec.compareTo(ExperimentSpotDesignReadSpec that) |
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesign.setReadSpecs(SortedSet<ExperimentSpotDesignReadSpec> readSpecs)
Setter for the field
readSpecs. |
| Modifier and Type | Method and Description |
|---|---|
int |
ExperimentSpotDesignReadSpecComparator.compare(ExperimentSpotDesignReadSpec o1,
ExperimentSpotDesignReadSpec o2) |
| Modifier and Type | Field and Description |
|---|---|
protected List<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesignReadSpecList.tList |
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentSpotDesignReadSpec> |
ExperimentSpotDesignReadSpecList.getList()
getList.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesignReadSpecList.add(ExperimentSpotDesignReadSpec ex)
add.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentSpotDesignReadSpecList.setList(List<ExperimentSpotDesignReadSpec> list)
setList.
|
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