Organism (SeqWare 1.1.2 API)

java.lang.Object
- net.sourceforge.seqware.common.model.Organism

All Implemented Interfaces:

Serializable, Comparable<Organism>, SecondTierModel
```
public class Organism
extends Object
implements Serializable, Comparable<Organism>, SecondTierModel
```
Organism class.

Version:

$Id: $Id

Author:

boconnor

See Also:
Serialized Form

Constructor Summary

Constructors
Constructor and Description

Organism()
Constructor for Organism.

Constructors
Constructor and Description
`Organism()` Constructor for Organism.

Method Summary

Methods
Modifier and Type	Method and Description
`int`	`compareTo(Organism that)`
`boolean`	`equals(Object other)`
`String`	`getAccession()` Getter for the field `accession`.
`String`	`getCode()` Getter for the field `code`.
`int`	`getModelId()` Get the id for this model
`String`	`getName()` Getter for the field `name`.
`Integer`	`getNcbiTaxId()` Getter for the field `ncbiTaxId`.
`Integer`	`getOrganismId()` Getter for the field `organismId`.
`int`	`hashCode()` hashCode.
`void`	`setAccession(String accession)` Setter for the field `accession`.
`void`	`setCode(String code)` Setter for the field `code`.
`void`	`setName(String name)` Setter for the field `name`.
`void`	`setNcbiTaxId(Integer ncbiTaxId)` Setter for the field `ncbiTaxId`.
`void`	`setOrganismId(Integer organismId)` Setter for the field `organismId`.
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - Organism
```
public Organism()
```
    Constructor for Organism.
- Method Detail
  - compareTo
```
public int compareTo(Organism that)
```
    Specified by:
    
    compareTo in interface Comparable<Organism>
    
    Parameters:
    that -
  - equals
```
public boolean equals(Object other)
```
    Overrides:
    
    equals in class Object
    
    Parameters:
    other -
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - hashCode
```
public int hashCode()
```
    hashCode.
    
    Overrides:
    
    hashCode in class Object
    
    Returns:
    a int.
  - getOrganismId
```
public Integer getOrganismId()
```
    Getter for the field organismId.
    
    Returns:
    a Integer object.
  - setOrganismId
```
public void setOrganismId(Integer organismId)
```
    Setter for the field organismId.
    
    Parameters:
    organismId - a Integer object.
  - getName
```
public String getName()
```
    Getter for the field name.
    
    Returns:
    a String object.
  - setName
```
public void setName(String name)
```
    Setter for the field name.
    
    Parameters:
    name - a String object.
  - getCode
```
public String getCode()
```
    Getter for the field code.
    
    Returns:
    a String object.
  - setCode
```
public void setCode(String code)
```
    Setter for the field code.
    
    Parameters:
    code - a String object.
  - getAccession
```
public String getAccession()
```
    Getter for the field accession.
    
    Returns:
    a String object.
  - setAccession
```
public void setAccession(String accession)
```
    Setter for the field accession.
    
    Parameters:
    accession - a String object.
  - getNcbiTaxId
```
public Integer getNcbiTaxId()
```
    Getter for the field ncbiTaxId.
    
    Returns:
    a Integer object.
  - setNcbiTaxId
```
public void setNcbiTaxId(Integer ncbiTaxId)
```
    Setter for the field ncbiTaxId.
    
    Parameters:
    ncbiTaxId - a Integer object.
  - getModelId
```
public int getModelId()
```
    Description copied from interface: SecondTierModel
    
    Get the id for this model
    
    Specified by:
    
    getModelId in interface SecondTierModel
    
    Returns:

Class Organism

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

Organism

Method Detail

compareTo

equals

toString

hashCode

getOrganismId

setOrganismId

getName

setName

getCode

setCode

getAccession

setAccession

getNcbiTaxId

setNcbiTaxId

getModelId