| Package | Description |
|---|---|
| net.sourceforge.seqware.common.business |
Looks like auto-generated classes for Hibernate.
|
| net.sourceforge.seqware.common.business.impl |
Looks like auto-generated implementation for Hibernate classes.
|
| net.sourceforge.seqware.common.dao |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.dao.hibernate |
More hibernate auto-generated.
|
| Modifier and Type | Method and Description |
|---|---|
SampleReportService.Status |
SampleReportService.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportService.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
static SampleReportService.Status |
SampleReportService.Status.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static SampleReportService.Status[] |
SampleReportService.Status.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
| Modifier and Type | Method and Description |
|---|---|
List<SampleReportService.Status> |
SampleReportService.getStatusesForSequencerRun(SequencerRun seqRun)
getStatusesForSequencerRun.
|
List<SampleReportService.Status> |
SampleReportService.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportService.getStatusesForWorkflow(SequencerRun seqRun,
Workflow workflow)
getStatusesForWorkflow.
|
List<SampleReportService.Status> |
SampleReportService.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
| Modifier and Type | Method and Description |
|---|---|
int |
SampleReportService.countOfStatus(SequencerRun seqRun,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportService.countOfStatus(SequencerRun seqRun,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportService.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportService.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
| Modifier and Type | Method and Description |
|---|---|
SampleReportService.Status |
SampleReportServiceImpl.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportServiceImpl.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
| Modifier and Type | Method and Description |
|---|---|
List<SampleReportService.Status> |
SampleReportServiceImpl.getStatusesForSequencerRun(SequencerRun seqRun)
getStatusesForSequencerRun.
|
List<SampleReportService.Status> |
SampleReportServiceImpl.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportServiceImpl.getStatusesForWorkflow(SequencerRun seqRun,
Workflow workflow)
getStatusesForWorkflow.
|
List<SampleReportService.Status> |
SampleReportServiceImpl.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
| Modifier and Type | Method and Description |
|---|---|
int |
SampleReportServiceImpl.countOfStatus(SequencerRun seqRun,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportServiceImpl.countOfStatus(SequencerRun seqRun,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportServiceImpl.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportServiceImpl.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
| Modifier and Type | Method and Description |
|---|---|
SampleReportService.Status |
SampleReportDAO.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportDAO.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
| Modifier and Type | Method and Description |
|---|---|
List<SampleReportService.Status> |
SampleReportDAO.getStatusesForSequencerRun(SequencerRun seqRun)
getStatusesForSequencerRun.
|
List<SampleReportService.Status> |
SampleReportDAO.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportDAO.getStatusesForWorkflow(SequencerRun seqRun,
Workflow workflow)
getStatusesForWorkflow.
|
List<SampleReportService.Status> |
SampleReportDAO.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
| Modifier and Type | Method and Description |
|---|---|
int |
SampleReportDAO.countOfStatus(SequencerRun seqRun,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAO.countOfStatus(SequencerRun seqRun,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAO.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAO.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
| Modifier and Type | Method and Description |
|---|---|
SampleReportService.Status |
SampleReportDAOHibernate.getStatus(Study study,
Sample sample,
IUS ius,
Lane lane,
SequencerRun seqRun,
Workflow workflow)
getStatus.
|
SampleReportService.Status |
SampleReportDAOHibernate.getStatus(Study study,
Sample childSample,
Workflow workflow)
getStatus.
|
| Modifier and Type | Method and Description |
|---|---|
List<SampleReportService.Status> |
SampleReportDAOHibernate.getStatusesForSequencerRun(SequencerRun seqRun)
getStatusesForSequencerRun.
|
List<SampleReportService.Status> |
SampleReportDAOHibernate.getStatusesForStudy(Study study)
getStatusesForStudy.
|
List<SampleReportService.Status> |
SampleReportDAOHibernate.getStatusesForWorkflow(SequencerRun seqRun,
Workflow workflow)
getStatusesForWorkflow.
|
List<SampleReportService.Status> |
SampleReportDAOHibernate.getStatusesForWorkflow(Study study,
Workflow workflow)
getStatusesForWorkflow.
|
| Modifier and Type | Method and Description |
|---|---|
int |
SampleReportDAOHibernate.countOfStatus(SequencerRun seqRun,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAOHibernate.countOfStatus(SequencerRun seqRun,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAOHibernate.countOfStatus(Study study,
SampleReportService.Status status)
countOfStatus.
|
int |
SampleReportDAOHibernate.countOfStatus(Study study,
Workflow workflow,
SampleReportService.Status status)
countOfStatus.
|
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