| Package | Description |
|---|---|
| net.sourceforge.seqware.common.dao |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.dao.hibernate |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.metadata |
Critical classes that effectively convert API calls into actions against the DB and web service.
|
| net.sourceforge.seqware.common.model |
Hibernate model classes for the metadb.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentAttribute> |
ExperimentAttributeDAO.findAll(Experiment experiment)
findAll.
|
List<ExperimentAttribute> |
ExperimentAttributeDAO.list()
list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentAttributeDAO.delete(ExperimentAttribute experimentAttribute)
delete.
|
void |
ExperimentAttributeDAO.insert(ExperimentAttribute experimentAttribute)
insert.
|
void |
ExperimentAttributeDAO.update(ExperimentAttribute experimentAttribute)
update.
|
| Modifier and Type | Method and Description |
|---|---|
List<ExperimentAttribute> |
ExperimentAttributeDAOHibernate.findAll(Experiment experiment)
findAll.
|
List<ExperimentAttribute> |
ExperimentAttributeDAOHibernate.list()
list.
|
| Modifier and Type | Method and Description |
|---|---|
void |
ExperimentAttributeDAOHibernate.delete(ExperimentAttribute experimentAttribute)
delete.
|
void |
ExperimentAttributeDAOHibernate.insert(ExperimentAttribute experimentAttribute)
insert.
|
void |
ExperimentAttributeDAOHibernate.update(ExperimentAttribute experimentAttribute)
update.
|
| Modifier and Type | Method and Description |
|---|---|
void |
MetadataWS.annotateExperiment(int experimentSWID,
ExperimentAttribute att,
Boolean skip)
annotateExperiment.
|
void |
Metadata.annotateExperiment(int experimentSWID,
ExperimentAttribute att,
Boolean skip)
annotateExperiment.
|
void |
MetadataNoConnection.annotateExperiment(int experimentSWID,
ExperimentAttribute att,
Boolean skip)
annotateExperiment.
|
void |
MetadataDB.annotateExperiment(int experimentSWID,
ExperimentAttribute att,
Boolean skip)
annotateExperiment.
|
void |
MetadataInMemory.annotateExperiment(int experimentSWID,
ExperimentAttribute att,
Boolean skip) |
| Modifier and Type | Method and Description |
|---|---|
void |
MetadataWS.annotateExperiment(int experimentSWID,
Set<ExperimentAttribute> atts)
annotateExperiment.
|
void |
Metadata.annotateExperiment(int experimentSWID,
Set<ExperimentAttribute> atts)
annotateExperiment.
|
void |
MetadataNoConnection.annotateExperiment(int experimentSWID,
Set<ExperimentAttribute> atts)
annotateExperiment.
|
void |
MetadataDB.annotateExperiment(int experimentSWID,
Set<ExperimentAttribute> atts)
annotateExperiment.
|
void |
MetadataInMemory.annotateExperiment(int experimentSWID,
Set<ExperimentAttribute> atts) |
| Modifier and Type | Method and Description |
|---|---|
Set<ExperimentAttribute> |
Experiment.getAnnotations() |
Set<ExperimentAttribute> |
Experiment.getExperimentAttributes()
Getter for the field
experimentAttributes. |
| Modifier and Type | Method and Description |
|---|---|
void |
Experiment.setExperimentAttributes(Set<ExperimentAttribute> experimentAttributes)
Setter for the field
experimentAttributes. |
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