WorkflowRunDAOHibernate (SeqWare 1.1.2 API)

java.lang.Object
- org.springframework.dao.support.DaoSupport
- - org.springframework.orm.hibernate3.support.HibernateDaoSupport
  - - net.sourceforge.seqware.common.dao.hibernate.WorkflowRunDAOHibernate

All Implemented Interfaces:

WorkflowRunDAO, org.springframework.beans.factory.InitializingBean
```
public class WorkflowRunDAOHibernate
extends org.springframework.orm.hibernate3.support.HibernateDaoSupport
implements WorkflowRunDAO
```
WorkflowRunDAOHibernate class.

Version:

$Id: $Id

Author:

boconnor

Field Summary
- Fields inherited from class org.springframework.dao.support.DaoSupport
  logger

Constructor Summary

Constructors
Constructor and Description

WorkflowRunDAOHibernate()
Constructor for WorkflowRunDAOHibernate.

Constructors
Constructor and Description
`WorkflowRunDAOHibernate()` Constructor for WorkflowRunDAOHibernate.

Method Summary

Methods
Modifier and Type	Method and Description
`void`	`delete(WorkflowRun workflowRun)` delete.
`List<WorkflowRun>`	`findByCriteria(String criteria)` findByCriteria.
`List<WorkflowRun>`	`findByCriteria(String criteria, boolean isCaseSens)` findByCriteria.
`WorkflowRun`	`findByID(Integer wfrID)` findByID.
`WorkflowRun`	`findByName(String name)` findByName.
`List<WorkflowRun>`	`findByOwnerID(Integer registrationID)` findByOwnerID.
`WorkflowRun`	`findBySWAccession(Integer swAccession)` findBySWAccession.
`Set<WorkflowRun>`	`findRunsForIUS(IUS ius)` findRunsForIUS.
`Integer`	`insert(Registration registration, WorkflowRun workflowRun)` insert.
`Integer`	`insert(WorkflowRun workflowRun)` Inserts a new WorkflowRun and returns its sw_accession number.
`List<WorkflowRun>`	`list()` list.
`List<WorkflowRun>`	`list(Registration registration, Boolean isAsc)` list.
`List<WorkflowRun>`	`listMyShared(Registration registration, Boolean isAsc)` listMyShared.
`List<Workflow>`	`listRelatedWorkflows(Registration registration)` listRelatedWorkflows.
`List<WorkflowRun>`	`listRunning(Registration registration, Boolean isAsc)` listRunning.
`List<WorkflowRun>`	`listSharedWithMe(Registration registration, Boolean isAsc)` listSharedWithMe.
`void`	`update(Registration registration, WorkflowRun workflowRun)` update.
`void`	`update(WorkflowRun workflowRun)` update.
`void`	`update(WorkflowRun workflowRun, List<Integer> laneIds)` update.
`WorkflowRun`	`updateDetached(Registration registration, WorkflowRun workflowRun)` updateDetached.
`WorkflowRun`	`updateDetached(WorkflowRun workflowRun)` updateDetached.

Methods inherited from class org.springframework.orm.hibernate3.support.HibernateDaoSupport
checkDaoConfig, convertHibernateAccessException, createHibernateTemplate, getHibernateTemplate, getSession, getSession, getSessionFactory, releaseSession, setHibernateTemplate, setSessionFactory

Methods inherited from class org.springframework.dao.support.DaoSupport
afterPropertiesSet, initDao

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - WorkflowRunDAOHibernate
```
public WorkflowRunDAOHibernate()
```
    Constructor for WorkflowRunDAOHibernate.
- Method Detail
  - insert
```
public Integer insert(WorkflowRun workflowRun)
```
    Inserts a new WorkflowRun and returns its sw_accession number.
    
    Specified by:
    
    insert in interface WorkflowRunDAO
    
    Parameters:
    workflowRun - Workflow run to be inserted.
    
    Returns:
    The SeqWare Accession number for the newly inserted workflow.
  - update
```
public void update(WorkflowRun workflowRun)
```
    update.
    
    Specified by:
    
    update in interface WorkflowRunDAO
    
    Parameters:
    workflowRun - a WorkflowRun object.
  - delete
```
public void delete(WorkflowRun workflowRun)
```
    delete.
    
    Specified by:
    
    delete in interface WorkflowRunDAO
    
    Parameters:
    workflowRun - a WorkflowRun object.
  - update
```
public void update(WorkflowRun workflowRun,
          List<Integer> laneIds)
```
    update.
    
    Specified by:
    
    update in interface WorkflowRunDAO
    
    Parameters:
    workflowRun - a WorkflowRun object.
    laneIds - a List object.
  - list
```
public List<WorkflowRun> list()
```
    list.
    
    Specified by:
    
    list in interface WorkflowRunDAO
    
    Returns:
    a List object.
  - list
```
public List<WorkflowRun> list(Registration registration,
                     Boolean isAsc)
```
    list.
    
    Specified by:
    
    list in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    isAsc - a Boolean object.
    
    Returns:
    a List object.
  - listRelatedWorkflows
```
public List<Workflow> listRelatedWorkflows(Registration registration)
```
    listRelatedWorkflows.
    
    Specified by:
    
    listRelatedWorkflows in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    
    Returns:
    a List object.
  - listMyShared
```
public List<WorkflowRun> listMyShared(Registration registration,
                             Boolean isAsc)
```
    listMyShared.
    
    Specified by:
    
    listMyShared in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    isAsc - a Boolean object.
    
    Returns:
    a List object.
  - listSharedWithMe
```
public List<WorkflowRun> listSharedWithMe(Registration registration,
                                 Boolean isAsc)
```
    listSharedWithMe.
    
    Specified by:
    
    listSharedWithMe in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    isAsc - a Boolean object.
    
    Returns:
    a List object.
  - listRunning
```
public List<WorkflowRun> listRunning(Registration registration,
                            Boolean isAsc)
```
    listRunning.
    
    Specified by:
    
    listRunning in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    isAsc - a Boolean object.
    
    Returns:
    a List object.
  - findByName
```
public WorkflowRun findByName(String name)
```
    findByName.
    
    Specified by:
    
    findByName in interface WorkflowRunDAO
    
    Parameters:
    name - a String object.
    
    Returns:
    a WorkflowRun object.
  - findByID
```
public WorkflowRun findByID(Integer wfrID)
```
    findByID.
    
    Specified by:
    
    findByID in interface WorkflowRunDAO
    
    Parameters:
    wfrID - a Integer object.
    
    Returns:
    a WorkflowRun object.
  - findBySWAccession
```
public WorkflowRun findBySWAccession(Integer swAccession)
```
    findBySWAccession.
    
    Specified by:
    
    findBySWAccession in interface WorkflowRunDAO
    
    Parameters:
    swAccession - a Integer object.
    
    Returns:
    a WorkflowRun object.
  - findByOwnerID
```
public List<WorkflowRun> findByOwnerID(Integer registrationID)
```
    findByOwnerID.
    
    Specified by:
    
    findByOwnerID in interface WorkflowRunDAO
    
    Parameters:
    registrationID - a Integer object.
    
    Returns:
    a List object.
  - findByCriteria
```
public List<WorkflowRun> findByCriteria(String criteria,
                               boolean isCaseSens)
```
    findByCriteria.
    
    Specified by:
    
    findByCriteria in interface WorkflowRunDAO
    
    Parameters:
    criteria - a String object.
    isCaseSens - a boolean.
    
    Returns:
    a List object.
  - findRunsForIUS
```
public Set<WorkflowRun> findRunsForIUS(IUS ius)
```
    findRunsForIUS.
    
    Specified by:
    
    findRunsForIUS in interface WorkflowRunDAO
    
    Parameters:
    ius - a IUS object.
    
    Returns:
    a Set object.
  - updateDetached
```
public WorkflowRun updateDetached(WorkflowRun workflowRun)
```
    updateDetached.
    
    Specified by:
    
    updateDetached in interface WorkflowRunDAO
    
    Parameters:
    workflowRun - a WorkflowRun object.
    
    Returns:
    a WorkflowRun object.
  - findByCriteria
```
public List<WorkflowRun> findByCriteria(String criteria)
```
    findByCriteria.
    
    Specified by:
    
    findByCriteria in interface WorkflowRunDAO
    
    Parameters:
    criteria - a String object.
    
    Returns:
    a List object.
  - update
```
public void update(Registration registration,
          WorkflowRun workflowRun)
```
    update.
    
    Specified by:
    
    update in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    workflowRun - a WorkflowRun object.
  - insert
```
public Integer insert(Registration registration,
             WorkflowRun workflowRun)
```
    insert.
    
    Specified by:
    
    insert in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    workflowRun - a WorkflowRun object.
    
    Returns:
    a Integer object.
  - updateDetached
```
public WorkflowRun updateDetached(Registration registration,
                         WorkflowRun workflowRun)
```
    updateDetached.
    
    Specified by:
    
    updateDetached in interface WorkflowRunDAO
    
    Parameters:
    registration - a Registration object.
    workflowRun - a WorkflowRun object.
    
    Returns:
    a WorkflowRun object.

Class WorkflowRunDAOHibernate

Field Summary

Fields inherited from class org.springframework.dao.support.DaoSupport

Constructor Summary

Method Summary

Methods inherited from class org.springframework.orm.hibernate3.support.HibernateDaoSupport

Methods inherited from class org.springframework.dao.support.DaoSupport

Methods inherited from class java.lang.Object

Constructor Detail

WorkflowRunDAOHibernate

Method Detail

insert

update

delete

update

list

list

listRelatedWorkflows

listMyShared

listSharedWithMe

listRunning

findByName

findByID

findBySWAccession

findByOwnerID

findByCriteria

findRunsForIUS

updateDetached

findByCriteria

update

insert

updateDetached