WorkflowServiceImpl (SeqWare 1.1.2 API)

java.lang.Object
- net.sourceforge.seqware.common.business.impl.WorkflowServiceImpl

All Implemented Interfaces:

WorkflowService
```
public class WorkflowServiceImpl
extends Object
implements WorkflowService
```
WorkflowServiceImpl class.

Version:

$Id: $Id

Author:

boconnor

Field Summary
- Fields inherited from interface net.sourceforge.seqware.common.business.WorkflowService
  NAME

Constructor Summary

Constructors
Constructor and Description

WorkflowServiceImpl()
Constructor for WorkflowServiceImpl.

Constructors
Constructor and Description
`WorkflowServiceImpl()` Constructor for WorkflowServiceImpl.

Method Summary

Methods
Modifier and Type	Method and Description
`void`	`delete(Workflow workflow)` delete.
`List<Workflow>`	`findByCriteria(String criteria, boolean isCaseSens)` findByCriteria.
`Workflow`	`findByID(Integer wfID)` findByID.
`Workflow`	`findByIDWithParams(Integer wfID)` findByIDWithParams.
`List<Workflow>`	`findByName(String name)` findByName.
`Workflow`	`findBySWAccession(Integer swAccession)` findBySWAccession.
`Integer`	`insert(Registration registration, Workflow workflow)` insert.
`Integer`	`insert(Workflow workflow)` Inserts a new Workflow and returns its sw_accession number.
`List<Workflow>`	`list()` list.
`List<Workflow>`	`list(Registration registration)` list.
`List<Workflow>`	`listMyShared(Registration registration)` listMyShared.
`List<Workflow>`	`listSequencerRunsWorkflows(SequencerRun sr)` listSequencerRunsWorkflows.
`List<Workflow>`	`listSharedWithMe(Registration registration)` listSharedWithMe.
`void`	`setWorkflowDAO(WorkflowDAO workflowDAO)` setWorkflowDAO.
`void`	`update(Registration registration, Workflow workflow)` update.
`void`	`update(Workflow workflow)` update.
`Workflow`	`updateDetached(Registration registration, Workflow workflow)` updateDetached.
`Workflow`	`updateDetached(Workflow workflow)` updateDetached.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - WorkflowServiceImpl
```
public WorkflowServiceImpl()
```
    Constructor for WorkflowServiceImpl.
- Method Detail
  - setWorkflowDAO
```
public void setWorkflowDAO(WorkflowDAO workflowDAO)
```
    setWorkflowDAO.
    Sets a private member variable with an instance of an implementation of WorkflowDAO. This method is called by the Spring framework at run time.
    
    Specified by:
    
    setWorkflowDAO in interface WorkflowService
    
    Parameters:
    workflowDAO - a WorkflowDAO object.
    See Also:
    WorkflowDAO
  - insert
```
public Integer insert(Workflow workflow)
```
    Inserts a new Workflow and returns its sw_accession number.
    
    Specified by:
    
    insert in interface WorkflowService
    
    Parameters:
    workflow - Workflow to be inserted.
    
    Returns:
    The SeqWare Accession number for the newly inserted workflow.
  - update
```
public void update(Workflow workflow)
```
    update.
    
    Specified by:
    
    update in interface WorkflowService
    
    Parameters:
    workflow - a Workflow object.
  - delete
```
public void delete(Workflow workflow)
```
    delete.
    
    Specified by:
    
    delete in interface WorkflowService
    
    Parameters:
    workflow - a Workflow object.
  - list
```
public List<Workflow> list()
```
    list.
    
    Specified by:
    
    list in interface WorkflowService
    
    Returns:
    a List object.
  - list
```
public List<Workflow> list(Registration registration)
```
    list.
    
    Specified by:
    
    list in interface WorkflowService
    
    Parameters:
    registration - a Registration object.
    
    Returns:
    a List object.
  - listMyShared
```
public List<Workflow> listMyShared(Registration registration)
```
    listMyShared.
    
    Specified by:
    
    listMyShared in interface WorkflowService
    
    Parameters:
    registration - a Registration object.
    
    Returns:
    a List object.
  - listSharedWithMe
```
public List<Workflow> listSharedWithMe(Registration registration)
```
    listSharedWithMe.
    
    Specified by:
    
    listSharedWithMe in interface WorkflowService
    
    Parameters:
    registration - a Registration object.
    
    Returns:
    a List object.
  - listSequencerRunsWorkflows
```
public List<Workflow> listSequencerRunsWorkflows(SequencerRun sr)
```
    listSequencerRunsWorkflows.
    
    Specified by:
    
    listSequencerRunsWorkflows in interface WorkflowService
    
    Parameters:
    sr - a SequencerRun object.
    
    Returns:
    a List object.
  - findByName
```
public List<Workflow> findByName(String name)
```
    findByName.
    
    Specified by:
    
    findByName in interface WorkflowService
    
    Parameters:
    name - a String object.
    
    Returns:
    a List object.
  - findByID
```
public Workflow findByID(Integer wfID)
```
    findByID.
    
    Specified by:
    
    findByID in interface WorkflowService
    
    Parameters:
    wfID - a Integer object.
    
    Returns:
    a Workflow object.
  - findByIDWithParams
```
public Workflow findByIDWithParams(Integer wfID)
```
    findByIDWithParams.
    
    Specified by:
    
    findByIDWithParams in interface WorkflowService
    
    Parameters:
    wfID - a Integer object.
    
    Returns:
    a Workflow object.
  - findBySWAccession
```
public Workflow findBySWAccession(Integer swAccession)
```
    findBySWAccession.
    
    Specified by:
    
    findBySWAccession in interface WorkflowService
    
    Parameters:
    swAccession - a Integer object.
    
    Returns:
    a Workflow object.
  - findByCriteria
```
public List<Workflow> findByCriteria(String criteria,
                            boolean isCaseSens)
```
    findByCriteria.
    
    Specified by:
    
    findByCriteria in interface WorkflowService
    
    Parameters:
    criteria - a String object.
    isCaseSens - a boolean.
    
    Returns:
    a List object.
  - updateDetached
```
public Workflow updateDetached(Workflow workflow)
```
    updateDetached.
    
    Specified by:
    
    updateDetached in interface WorkflowService
    
    Parameters:
    workflow - a Workflow object.
    
    Returns:
    a Workflow object.
  - insert
```
public Integer insert(Registration registration,
             Workflow workflow)
```
    insert.
    
    Specified by:
    
    insert in interface WorkflowService
    
    Parameters:
    registration - a Registration object.
    workflow - a Workflow object.
    
    Returns:
    a Integer object.
  - updateDetached
```
public Workflow updateDetached(Registration registration,
                      Workflow workflow)
```
    updateDetached.
    
    Specified by:
    
    updateDetached in interface WorkflowService
    
    Parameters:
    registration - a Registration object.
    workflow - a Workflow object.
    
    Returns:
    a Workflow object.
  - update
```
public void update(Registration registration,
          Workflow workflow)
```
    update.
    
    Specified by:
    
    update in interface WorkflowService
    
    Parameters:
    registration - a Registration object.
    workflow - a Workflow object.

Class WorkflowServiceImpl

Field Summary

Fields inherited from interface net.sourceforge.seqware.common.business.WorkflowService

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

WorkflowServiceImpl

Method Detail

setWorkflowDAO

insert

update

delete

list

list

listMyShared

listSharedWithMe

listSequencerRunsWorkflows

findByName

findByID

findByIDWithParams

findBySWAccession

findByCriteria

updateDetached

insert

updateDetached

update