SequencerRun (SeqWare 1.1.2 API)

java.lang.Object
- io.seqware.webservice.generated.model.SequencerRun

All Implemented Interfaces:

Serializable
```
@Entity
public class SequencerRun
extends Object
implements Serializable
```
Author:

boconnor

See Also:
Serialized Form

Constructor Summary

Constructors
Constructor and Description

SequencerRun()

SequencerRun(Integer sequencerRunId)

SequencerRun(Integer sequencerRunId, Date createTstmp)

Constructors
Constructor and Description
`SequencerRun()`
`SequencerRun(Integer sequencerRunId)`
`SequencerRun(Integer sequencerRunId, Date createTstmp)`

Method Summary

Methods
Modifier and Type	Method and Description
`boolean`	`equals(Object object)`
`String`	`getBaseCaller()`
`String`	`getColorMatrix()`
`String`	`getColorMatrixCode()`
`Date`	`getCreateTstmp()`
`Integer`	`getCycleCount()`
`String`	`getCycleDescriptor()`
`String`	`getCycleSequence()`
`String`	`getDescription()`
`String`	`getFilePath()`
`Integer`	`getFlowCount()`
`String`	`getFlowSequence()`
`String`	`getInstrumentName()`
`Collection<Lane>`	`getLaneCollection()`
`String`	`getName()`
`Registration`	`getOwnerId()`
`Boolean`	`getPairedEnd()`
`String`	`getPairedFilePath()`
`Platform`	`getPlatformId()`
`Boolean`	`getProcess()`
`Collection<ProcessingSequencerRuns>`	`getProcessingSequencerRunsCollection()`
`String`	`getQualityScorer()`
`Integer`	`getRefLane()`
`String`	`getRunCenter()`
`Collection<SequencerRunAttribute>`	`getSequencerRunAttributeCollection()`
`Integer`	`getSequencerRunId()`
`Boolean`	`getSkip()`
`String`	`getSlide1FilePath()`
`Integer`	`getSlide1LaneCount()`
`String`	`getSlide2FilePath()`
`Integer`	`getSlide2LaneCount()`
`Integer`	`getSlideCount()`
`String`	`getStatus()`
`Integer`	`getSwAccession()`
`Timestamp`	`getUpdateTstmp()`
`Boolean`	`getUseIparIntensities()`
`int`	`hashCode()`
`void`	`setBaseCaller(String baseCaller)`
`void`	`setColorMatrix(String colorMatrix)`
`void`	`setColorMatrixCode(String colorMatrixCode)`
`void`	`setCreateTstmp(Date createTstmp)`
`void`	`setCycleCount(Integer cycleCount)`
`void`	`setCycleDescriptor(String cycleDescriptor)`
`void`	`setCycleSequence(String cycleSequence)`
`void`	`setDescription(String description)`
`void`	`setFilePath(String filePath)`
`void`	`setFlowCount(Integer flowCount)`
`void`	`setFlowSequence(String flowSequence)`
`void`	`setInstrumentName(String instrumentName)`
`void`	`setLaneCollection(Collection<Lane> laneCollection)`
`void`	`setName(String name)`
`void`	`setOwnerId(Registration ownerId)`
`void`	`setPairedEnd(Boolean pairedEnd)`
`void`	`setPairedFilePath(String pairedFilePath)`
`void`	`setPlatformId(Platform platformId)`
`void`	`setProcess(Boolean process)`
`void`	`setProcessingSequencerRunsCollection(Collection<ProcessingSequencerRuns> processingSequencerRunsCollection)`
`void`	`setQualityScorer(String qualityScorer)`
`void`	`setRefLane(Integer refLane)`
`void`	`setRunCenter(String runCenter)`
`void`	`setSequencerRunAttributeCollection(Collection<SequencerRunAttribute> sequencerRunAttributeCollection)`
`void`	`setSequencerRunId(Integer sequencerRunId)`
`void`	`setSkip(Boolean skip)`
`void`	`setSlide1FilePath(String slide1FilePath)`
`void`	`setSlide1LaneCount(Integer slide1LaneCount)`
`void`	`setSlide2FilePath(String slide2FilePath)`
`void`	`setSlide2LaneCount(Integer slide2LaneCount)`
`void`	`setSlideCount(Integer slideCount)`
`void`	`setStatus(String status)`
`void`	`setSwAccession(Integer swAccession)`
`void`	`setUpdateTstmp(Timestamp updateTstmp)`
`void`	`setUseIparIntensities(Boolean useIparIntensities)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

SequencerRun
```
public SequencerRun()
```

SequencerRun

public SequencerRun(Integer sequencerRunId)

SequencerRun

public SequencerRun(Integer sequencerRunId,
            Date createTstmp)

Method Detail

getSequencerRunId
```
public Integer getSequencerRunId()
```

setSequencerRunId

public void setSequencerRunId(Integer sequencerRunId)

getName
```
public String getName()
```

setName
```
public void setName(String name)
```

getDescription
```
public String getDescription()
```

setDescription

public void setDescription(String description)

getStatus
```
public String getStatus()
```

setStatus
```
public void setStatus(String status)
```

getInstrumentName
```
public String getInstrumentName()
```

setInstrumentName

public void setInstrumentName(String instrumentName)

getCycleDescriptor
```
public String getCycleDescriptor()
```

setCycleDescriptor

public void setCycleDescriptor(String cycleDescriptor)

getCycleCount
```
public Integer getCycleCount()
```

setCycleCount

public void setCycleCount(Integer cycleCount)

getCycleSequence
```
public String getCycleSequence()
```

setCycleSequence

public void setCycleSequence(String cycleSequence)

getFilePath
```
public String getFilePath()
```

setFilePath

public void setFilePath(String filePath)

getPairedEnd
```
public Boolean getPairedEnd()
```

setPairedEnd

public void setPairedEnd(Boolean pairedEnd)

getProcess
```
public Boolean getProcess()
```

setProcess

public void setProcess(Boolean process)

getRefLane
```
public Integer getRefLane()
```

setRefLane

public void setRefLane(Integer refLane)

getPairedFilePath
```
public String getPairedFilePath()
```

setPairedFilePath

public void setPairedFilePath(String pairedFilePath)

getUseIparIntensities

public Boolean getUseIparIntensities()

setUseIparIntensities

public void setUseIparIntensities(Boolean useIparIntensities)

getColorMatrix
```
public String getColorMatrix()
```

setColorMatrix

public void setColorMatrix(String colorMatrix)

getColorMatrixCode
```
public String getColorMatrixCode()
```

setColorMatrixCode

public void setColorMatrixCode(String colorMatrixCode)

getSlideCount
```
public Integer getSlideCount()
```

setSlideCount

public void setSlideCount(Integer slideCount)

getSlide1LaneCount
```
public Integer getSlide1LaneCount()
```

setSlide1LaneCount

public void setSlide1LaneCount(Integer slide1LaneCount)

getSlide1FilePath
```
public String getSlide1FilePath()
```

setSlide1FilePath

public void setSlide1FilePath(String slide1FilePath)

getSlide2LaneCount
```
public Integer getSlide2LaneCount()
```

setSlide2LaneCount

public void setSlide2LaneCount(Integer slide2LaneCount)

getSlide2FilePath
```
public String getSlide2FilePath()
```

setSlide2FilePath

public void setSlide2FilePath(String slide2FilePath)

getFlowSequence
```
public String getFlowSequence()
```

setFlowSequence

public void setFlowSequence(String flowSequence)

getFlowCount
```
public Integer getFlowCount()
```

setFlowCount

public void setFlowCount(Integer flowCount)

getRunCenter
```
public String getRunCenter()
```

setRunCenter

public void setRunCenter(String runCenter)

getBaseCaller
```
public String getBaseCaller()
```

setBaseCaller

public void setBaseCaller(String baseCaller)

getQualityScorer
```
public String getQualityScorer()
```

setQualityScorer

public void setQualityScorer(String qualityScorer)

getSwAccession
```
public Integer getSwAccession()
```

setSwAccession

public void setSwAccession(Integer swAccession)

getCreateTstmp
```
public Date getCreateTstmp()
```

setCreateTstmp

public void setCreateTstmp(Date createTstmp)

getUpdateTstmp
```
public Timestamp getUpdateTstmp()
```

setUpdateTstmp

public void setUpdateTstmp(Timestamp updateTstmp)

getSkip
```
public Boolean getSkip()
```

setSkip
```
public void setSkip(Boolean skip)
```

getOwnerId
```
public Registration getOwnerId()
```

setOwnerId

public void setOwnerId(Registration ownerId)

getPlatformId
```
public Platform getPlatformId()
```

setPlatformId

public void setPlatformId(Platform platformId)

getProcessingSequencerRunsCollection

public Collection<ProcessingSequencerRuns> getProcessingSequencerRunsCollection()

setProcessingSequencerRunsCollection

public void setProcessingSequencerRunsCollection(Collection<ProcessingSequencerRuns> processingSequencerRunsCollection)

getLaneCollection

public Collection<Lane> getLaneCollection()

setLaneCollection

public void setLaneCollection(Collection<Lane> laneCollection)

getSequencerRunAttributeCollection

public Collection<SequencerRunAttribute> getSequencerRunAttributeCollection()

setSequencerRunAttributeCollection

public void setSequencerRunAttributeCollection(Collection<SequencerRunAttribute> sequencerRunAttributeCollection)

hashCode
```
public int hashCode()
```
Overrides:

hashCode in class Object

equals
```
public boolean equals(Object object)
```
Overrides:

equals in class Object

toString
```
public String toString()
```
Overrides:

toString in class Object

Class SequencerRun

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

SequencerRun

SequencerRun

SequencerRun

Method Detail

getSequencerRunId

setSequencerRunId

getName

setName

getDescription

setDescription

getStatus

setStatus

getInstrumentName

setInstrumentName

getCycleDescriptor

setCycleDescriptor

getCycleCount

setCycleCount

getCycleSequence

setCycleSequence

getFilePath

setFilePath

getPairedEnd

setPairedEnd

getProcess

setProcess

getRefLane

setRefLane

getPairedFilePath

setPairedFilePath

getUseIparIntensities

setUseIparIntensities

getColorMatrix

setColorMatrix

getColorMatrixCode

setColorMatrixCode

getSlideCount

setSlideCount

getSlide1LaneCount

setSlide1LaneCount

getSlide1FilePath

setSlide1FilePath

getSlide2LaneCount

setSlide2LaneCount

getSlide2FilePath

setSlide2FilePath

getFlowSequence

setFlowSequence

getFlowCount

setFlowCount

getRunCenter

setRunCenter

getBaseCaller

setBaseCaller

getQualityScorer

setQualityScorer

getSwAccession

setSwAccession

getCreateTstmp

setCreateTstmp

getUpdateTstmp

setUpdateTstmp

getSkip

setSkip

getOwnerId

setOwnerId

getPlatformId

setPlatformId

getProcessingSequencerRunsCollection

setProcessingSequencerRunsCollection

getLaneCollection

setLaneCollection

getSequencerRunAttributeCollection

setSequencerRunAttributeCollection

hashCode