| Package | Description |
|---|---|
| io.seqware.common.model |
Unify status Strings across SeqWare.
|
| net.sourceforge.seqware.common.metadata |
Critical classes that effectively convert API calls into actions against the DB and web service.
|
| net.sourceforge.seqware.common.model |
Hibernate model classes for the metadb.
|
| net.sourceforge.seqware.pipeline.plugins.batchmetadatainjection |
PDE's batch metadata injection utility
|
| Modifier and Type | Method and Description |
|---|---|
static SequencerRunStatus |
SequencerRunStatus.valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static SequencerRunStatus[] |
SequencerRunStatus.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
| Modifier and Type | Method and Description |
|---|---|
ReturnValue |
MetadataWS.addSequencerRun(Integer platformAccession,
String name,
String description,
boolean pairdEnd,
boolean skip,
String filePath,
SequencerRunStatus status)
FIXME: there are problems with setting accession when I should set ID
|
ReturnValue |
Metadata.addSequencerRun(Integer platformAccession,
String name,
String description,
boolean pairdEnd,
boolean skip,
String filePath,
SequencerRunStatus status)
addSample.
|
ReturnValue |
MetadataNoConnection.addSequencerRun(Integer platformAccession,
String name,
String description,
boolean pairdEnd,
boolean skip,
String filePath,
SequencerRunStatus status) |
ReturnValue |
MetadataDB.addSequencerRun(Integer platformAccession,
String name,
String description,
boolean pairdEnd,
boolean skip,
String filePath,
SequencerRunStatus status) |
ReturnValue |
MetadataInMemory.addSequencerRun(Integer platformAccession,
String name,
String description,
boolean pairdEnd,
boolean skip,
String filePath,
SequencerRunStatus status) |
| Modifier and Type | Method and Description |
|---|---|
SequencerRunStatus |
SequencerRun.getStatus()
Getter for the field
status. |
| Modifier and Type | Method and Description |
|---|---|
void |
SequencerRun.setStatus(SequencerRunStatus status)
Setter for the field
status. |
| Modifier and Type | Method and Description |
|---|---|
SequencerRunStatus |
RunInfo.getStatus()
Get the value of the sequencer run status
|
| Modifier and Type | Method and Description |
|---|---|
void |
RunInfo.setStatus(SequencerRunStatus status)
Set the value of the sequencer run status
|
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