StudyReportTableController (SeqWare 1.1.2 API)

java.lang.Object
- org.springframework.context.support.ApplicationObjectSupport
- - org.springframework.web.context.support.WebApplicationObjectSupport
  - - org.springframework.web.servlet.support.WebContentGenerator
    - - org.springframework.web.servlet.mvc.AbstractController
      - org.springframework.web.servlet.mvc.BaseCommandController
        
        net.sourceforge.solexatools.webapp.controller.StudyReportTableController

All Implemented Interfaces:

org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware, org.springframework.web.context.ServletContextAware, org.springframework.web.servlet.mvc.Controller
```
public class StudyReportTableController
extends org.springframework.web.servlet.mvc.BaseCommandController
```
StudyReportTableController class.

Version:

$Id: $Id

Author:

boconnor

Field Summary

Fields
Modifier and Type	Field and Description
`static String`	`FILE_EXPERIMENT_NAME` Constant `FILE_EXPERIMENT_NAME="f_exp_name"`
`static String`	`FILE_EXPERIMENT_SWID` Constant `FILE_EXPERIMENT_SWID="f_exp_swid"`
`static String`	`FILE_FILE` Constant `FILE_FILE="f_file"`
`static String`	`FILE_IUS` Constant `FILE_IUS="f_ius"`
`static String`	`FILE_IUS_SWID` Constant `FILE_IUS_SWID="f_ius_swid"`
`static String`	`FILE_IUS_TAG` Constant `FILE_IUS_TAG="f_ius_tag"`
`static String`	`FILE_LANE` Constant `FILE_LANE="f_lane"`
`static String`	`FILE_LANE_NAME` Constant `FILE_LANE_NAME="f_lane_name"`
`static String`	`FILE_LANE_NUMBER` Constant `FILE_LANE_NUMBER="f_lane_num"`
`static String`	`FILE_LANE_SWID` Constant `FILE_LANE_SWID="f_lane_swid"`
`static String`	`FILE_LIBRARY` Constant `FILE_LIBRARY="f_library"`
`static String`	`FILE_META_TYPE` Constant `FILE_META_TYPE="f_file_meta"`
`static String`	`FILE_PARENT_SAMPLE_NAME` Constant `FILE_PARENT_SAMPLE_NAME="f_sample_name"`
`static String`	`FILE_PARENT_SAMPLE_SWID` Constant `FILE_PARENT_SAMPLE_SWID="f_sample_swid"`
`static String`	`FILE_PATH` Constant `FILE_PATH="f_file_path"`
`static String`	`FILE_PROCESSING_ALG` Constant `FILE_PROCESSING_ALG="f_processing_alg"`
`static String`	`FILE_PROCESSING_SWID` Constant `FILE_PROCESSING_SWID="f_processing_swid"`
`static String`	`FILE_RUN_NAME` Constant `FILE_RUN_NAME="f_run_name"`
`static String`	`FILE_RUN_SWID` Constant `FILE_RUN_SWID="f_run_swid"`
`static String`	`FILE_SAMPLE` Constant `FILE_SAMPLE="f_sample"`
`static String`	`FILE_SAMPLE_NAME` Constant `FILE_SAMPLE_NAME="f_child_sample_name"`
`static String`	`FILE_SAMPLE_SWID` Constant `FILE_SAMPLE_SWID="f_child_sample_swid"`
`static String`	`FILE_SEQUENCER_NAME` Constant `FILE_SEQUENCER_NAME="f_seqrun_name"`
`static String`	`FILE_SEQUENCER_SWID` Constant `FILE_SEQUENCER_SWID="f_seqrun_swid"`
`static String`	`FILE_STUDY_SWID` Constant `FILE_STUDY_SWID="f_study_swid"`
`static String`	`FILE_STUDY_TITLE` Constant `FILE_STUDY_TITLE="f_study_title"`
`static String`	`FILE_SWID` Constant `FILE_SWID="f_file_swid"`
`static String`	`FILE_TEMPLATE` Constant `FILE_TEMPLATE="f_template"`
`static String`	`FILE_TISSUE` Constant `FILE_TISSUE="f_tissue"`
`static String`	`FILE_WF_NAME` Constant `FILE_WF_NAME="f_wf_name"`
`static String`	`FILE_WF_SWID` Constant `FILE_WF_SWID="f_wf_swid"`
`static String`	`FILE_WF_VERSION` Constant `FILE_WF_VERSION="f_wf_version"`
`static String`	`JSON` Constant `JSON="json"`
`static String`	`PAGE_NUM` Constant `PAGE_NUM="page"`
`static String`	`ROWS_PER_PAGE` Constant `ROWS_PER_PAGE="rp"`
`static String`	`SAMPLE_CHILD` Constant `SAMPLE_CHILD="s_child"`
`static String`	`SAMPLE_SAMPLE` Constant `SAMPLE_SAMPLE="s_sample"`
`static String`	`SORT_NAME` Constant `SORT_NAME="sortname"`
`static String`	`SORT_ORDER` Constant `SORT_ORDER="sortorder"`
`static String`	`SORT_ORDER_ASC` Constant `SORT_ORDER_ASC="asc"`
`static String`	`SORT_ORDER_DESC` Constant `SORT_ORDER_DESC="desc"`
`static String`	`STUDY_ID` Constant `STUDY_ID="study_id"`
`static String`	`TABLE_MODEL` Constant `TABLE_MODEL="tablemodel"`
`static String`	`TABLE_SEL` Constant `TABLE_SEL="tablesel"`

Fields inherited from class org.springframework.web.servlet.mvc.BaseCommandController
DEFAULT_COMMAND_NAME

Fields inherited from class org.springframework.web.servlet.support.WebContentGenerator
METHOD_GET, METHOD_HEAD, METHOD_POST

Fields inherited from class org.springframework.context.support.ApplicationObjectSupport
logger

Constructor Summary

Constructors
Constructor and Description

StudyReportTableController()
Constructor for StudyReportTableController.

Constructors
Constructor and Description
`StudyReportTableController()` Constructor for StudyReportTableController.

Method Summary

Methods
Modifier and Type	Method and Description
`protected org.springframework.web.servlet.ModelAndView`	`handleRequestInternal(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)`
`void`	`setFileReportService(FileReportService service)` Setter for the field `fileReportService`.
`void`	`setSampleReportService(SampleReportService service)` Setter for the field `sampleReportService`.
`void`	`setSampleService(SampleService service)` Setter for the field `sampleService`.
`void`	`setStudyService(StudyService studyService)` Setter for the field `studyService`.

Methods inherited from class org.springframework.web.servlet.mvc.BaseCommandController
bindAndValidate, checkCommand, createBinder, createCommand, getBindingErrorProcessor, getCommand, getCommandClass, getCommandName, getMessageCodesResolver, getPropertyEditorRegistrars, getValidator, getValidators, getWebBindingInitializer, initApplicationContext, initBinder, isValidateOnBinding, onBind, onBind, onBindAndValidate, prepareBinder, setBindingErrorProcessor, setCommandClass, setCommandName, setMessageCodesResolver, setPropertyEditorRegistrar, setPropertyEditorRegistrars, setValidateOnBinding, setValidator, setValidators, setWebBindingInitializer, suppressBinding, suppressValidation, suppressValidation, suppressValidation, useDirectFieldAccess

Methods inherited from class org.springframework.web.servlet.mvc.AbstractController
handleRequest, isSynchronizeOnSession, setSynchronizeOnSession

Methods inherited from class org.springframework.web.servlet.support.WebContentGenerator
applyCacheSeconds, applyCacheSeconds, cacheForSeconds, cacheForSeconds, checkAndPrepare, checkAndPrepare, getCacheSeconds, getSupportedMethods, isAlwaysMustRevalidate, isRequireSession, isUseCacheControlHeader, isUseCacheControlNoStore, isUseExpiresHeader, preventCaching, setAlwaysMustRevalidate, setCacheSeconds, setRequireSession, setSupportedMethods, setUseCacheControlHeader, setUseCacheControlNoStore, setUseExpiresHeader

Methods inherited from class org.springframework.web.context.support.WebApplicationObjectSupport
getServletContext, getTempDir, getWebApplicationContext, initApplicationContext, initServletContext, isContextRequired, setServletContext

Methods inherited from class org.springframework.context.support.ApplicationObjectSupport
getApplicationContext, getMessageSourceAccessor, requiredContextClass, setApplicationContext

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - STUDY_ID
```
public static final String STUDY_ID
```
    Constant STUDY_ID="study_id"
    
    See Also:
    Constant Field Values
  - JSON
```
public static final String JSON
```
    Constant JSON="json"
    
    See Also:
    Constant Field Values
  - SORT_NAME
```
public static final String SORT_NAME
```
    Constant SORT_NAME="sortname"
    
    See Also:
    Constant Field Values
  - SORT_ORDER
```
public static final String SORT_ORDER
```
    Constant SORT_ORDER="sortorder"
    
    See Also:
    Constant Field Values
  - SORT_ORDER_ASC
```
public static final String SORT_ORDER_ASC
```
    Constant SORT_ORDER_ASC="asc"
    
    See Also:
    Constant Field Values
  - SORT_ORDER_DESC
```
public static final String SORT_ORDER_DESC
```
    Constant SORT_ORDER_DESC="desc"
    
    See Also:
    Constant Field Values
  - PAGE_NUM
```
public static final String PAGE_NUM
```
    Constant PAGE_NUM="page"
    
    See Also:
    Constant Field Values
  - ROWS_PER_PAGE
```
public static final String ROWS_PER_PAGE
```
    Constant ROWS_PER_PAGE="rp"
    
    See Also:
    Constant Field Values
  - TABLE_SEL
```
public static final String TABLE_SEL
```
    Constant TABLE_SEL="tablesel"
    
    See Also:
    Constant Field Values
  - TABLE_MODEL
```
public static final String TABLE_MODEL
```
    Constant TABLE_MODEL="tablemodel"
    
    See Also:
    Constant Field Values
  - FILE_SAMPLE
```
public static final String FILE_SAMPLE
```
    Constant FILE_SAMPLE="f_sample"
    
    See Also:
    Constant Field Values
  - FILE_TISSUE
```
public static final String FILE_TISSUE
```
    Constant FILE_TISSUE="f_tissue"
    
    See Also:
    Constant Field Values
  - FILE_LIBRARY
```
public static final String FILE_LIBRARY
```
    Constant FILE_LIBRARY="f_library"
    
    See Also:
    Constant Field Values
  - FILE_TEMPLATE
```
public static final String FILE_TEMPLATE
```
    Constant FILE_TEMPLATE="f_template"
    
    See Also:
    Constant Field Values
  - FILE_IUS
```
public static final String FILE_IUS
```
    Constant FILE_IUS="f_ius"
    
    See Also:
    Constant Field Values
  - FILE_LANE
```
public static final String FILE_LANE
```
    Constant FILE_LANE="f_lane"
    
    See Also:
    Constant Field Values
  - FILE_FILE
```
public static final String FILE_FILE
```
    Constant FILE_FILE="f_file"
    
    See Also:
    Constant Field Values
  - FILE_STUDY_TITLE
```
public static final String FILE_STUDY_TITLE
```
    Constant FILE_STUDY_TITLE="f_study_title"
    
    See Also:
    Constant Field Values
  - FILE_STUDY_SWID
```
public static final String FILE_STUDY_SWID
```
    Constant FILE_STUDY_SWID="f_study_swid"
    
    See Also:
    Constant Field Values
  - FILE_EXPERIMENT_NAME
```
public static final String FILE_EXPERIMENT_NAME
```
    Constant FILE_EXPERIMENT_NAME="f_exp_name"
    
    See Also:
    Constant Field Values
  - FILE_EXPERIMENT_SWID
```
public static final String FILE_EXPERIMENT_SWID
```
    Constant FILE_EXPERIMENT_SWID="f_exp_swid"
    
    See Also:
    Constant Field Values
  - FILE_PARENT_SAMPLE_NAME
```
public static final String FILE_PARENT_SAMPLE_NAME
```
    Constant FILE_PARENT_SAMPLE_NAME="f_sample_name"
    
    See Also:
    Constant Field Values
  - FILE_PARENT_SAMPLE_SWID
```
public static final String FILE_PARENT_SAMPLE_SWID
```
    Constant FILE_PARENT_SAMPLE_SWID="f_sample_swid"
    
    See Also:
    Constant Field Values
  - FILE_SAMPLE_NAME
```
public static final String FILE_SAMPLE_NAME
```
    Constant FILE_SAMPLE_NAME="f_child_sample_name"
    
    See Also:
    Constant Field Values
  - FILE_SAMPLE_SWID
```
public static final String FILE_SAMPLE_SWID
```
    Constant FILE_SAMPLE_SWID="f_child_sample_swid"
    
    See Also:
    Constant Field Values
  - FILE_SEQUENCER_NAME
```
public static final String FILE_SEQUENCER_NAME
```
    Constant FILE_SEQUENCER_NAME="f_seqrun_name"
    
    See Also:
    Constant Field Values
  - FILE_SEQUENCER_SWID
```
public static final String FILE_SEQUENCER_SWID
```
    Constant FILE_SEQUENCER_SWID="f_seqrun_swid"
    
    See Also:
    Constant Field Values
  - FILE_LANE_NAME
```
public static final String FILE_LANE_NAME
```
    Constant FILE_LANE_NAME="f_lane_name"
    
    See Also:
    Constant Field Values
  - FILE_LANE_NUMBER
```
public static final String FILE_LANE_NUMBER
```
    Constant FILE_LANE_NUMBER="f_lane_num"
    
    See Also:
    Constant Field Values
  - FILE_LANE_SWID
```
public static final String FILE_LANE_SWID
```
    Constant FILE_LANE_SWID="f_lane_swid"
    
    See Also:
    Constant Field Values
  - FILE_IUS_TAG
```
public static final String FILE_IUS_TAG
```
    Constant FILE_IUS_TAG="f_ius_tag"
    
    See Also:
    Constant Field Values
  - FILE_IUS_SWID
```
public static final String FILE_IUS_SWID
```
    Constant FILE_IUS_SWID="f_ius_swid"
    
    See Also:
    Constant Field Values
  - FILE_WF_NAME
```
public static final String FILE_WF_NAME
```
    Constant FILE_WF_NAME="f_wf_name"
    
    See Also:
    Constant Field Values
  - FILE_WF_VERSION
```
public static final String FILE_WF_VERSION
```
    Constant FILE_WF_VERSION="f_wf_version"
    
    See Also:
    Constant Field Values
  - FILE_WF_SWID
```
public static final String FILE_WF_SWID
```
    Constant FILE_WF_SWID="f_wf_swid"
    
    See Also:
    Constant Field Values
  - FILE_RUN_NAME
```
public static final String FILE_RUN_NAME
```
    Constant FILE_RUN_NAME="f_run_name"
    
    See Also:
    Constant Field Values
  - FILE_RUN_SWID
```
public static final String FILE_RUN_SWID
```
    Constant FILE_RUN_SWID="f_run_swid"
    
    See Also:
    Constant Field Values
  - FILE_PROCESSING_ALG
```
public static final String FILE_PROCESSING_ALG
```
    Constant FILE_PROCESSING_ALG="f_processing_alg"
    
    See Also:
    Constant Field Values
  - FILE_PROCESSING_SWID
```
public static final String FILE_PROCESSING_SWID
```
    Constant FILE_PROCESSING_SWID="f_processing_swid"
    
    See Also:
    Constant Field Values
  - FILE_META_TYPE
```
public static final String FILE_META_TYPE
```
    Constant FILE_META_TYPE="f_file_meta"
    
    See Also:
    Constant Field Values
  - FILE_SWID
```
public static final String FILE_SWID
```
    Constant FILE_SWID="f_file_swid"
    
    See Also:
    Constant Field Values
  - FILE_PATH
```
public static final String FILE_PATH
```
    Constant FILE_PATH="f_file_path"
    
    See Also:
    Constant Field Values
  - SAMPLE_SAMPLE
```
public static final String SAMPLE_SAMPLE
```
    Constant SAMPLE_SAMPLE="s_sample"
    
    See Also:
    Constant Field Values
  - SAMPLE_CHILD
```
public static final String SAMPLE_CHILD
```
    Constant SAMPLE_CHILD="s_child"
    
    See Also:
    Constant Field Values
- Constructor Detail
  - StudyReportTableController
```
public StudyReportTableController()
```
    Constructor for StudyReportTableController.
- Method Detail
  - handleRequestInternal
```
protected org.springframework.web.servlet.ModelAndView handleRequestInternal(javax.servlet.http.HttpServletRequest request,
                                                                 javax.servlet.http.HttpServletResponse response)
                                                                      throws Exception
```
    Specified by:
    
    handleRequestInternal in class org.springframework.web.servlet.mvc.AbstractController
    
    Returns:
    
    Throws:
    
    Exception
  - setStudyService
```
public void setStudyService(StudyService studyService)
```
    Setter for the field studyService.
    
    Parameters:
    studyService - a StudyService object.
  - setSampleService
```
public void setSampleService(SampleService service)
```
    Setter for the field sampleService.
    
    Parameters:
    service - a SampleService object.
  - setFileReportService
```
public void setFileReportService(FileReportService service)
```
    Setter for the field fileReportService.
    
    Parameters:
    service - a FileReportService object.
  - setSampleReportService
```
public void setSampleReportService(SampleReportService service)
```
    Setter for the field sampleReportService.
    
    Parameters:
    service - a SampleReportService object.

Class StudyReportTableController

Field Summary

Fields inherited from class org.springframework.web.servlet.mvc.BaseCommandController

Fields inherited from class org.springframework.web.servlet.support.WebContentGenerator

Fields inherited from class org.springframework.context.support.ApplicationObjectSupport

Constructor Summary

Method Summary

Methods inherited from class org.springframework.web.servlet.mvc.BaseCommandController

Methods inherited from class org.springframework.web.servlet.mvc.AbstractController

Methods inherited from class org.springframework.web.servlet.support.WebContentGenerator

Methods inherited from class org.springframework.web.context.support.WebApplicationObjectSupport

Methods inherited from class org.springframework.context.support.ApplicationObjectSupport

Methods inherited from class java.lang.Object

Field Detail

STUDY_ID

JSON

SORT_NAME

SORT_ORDER

SORT_ORDER_ASC

SORT_ORDER_DESC

PAGE_NUM

ROWS_PER_PAGE

TABLE_SEL

TABLE_MODEL

FILE_SAMPLE

FILE_TISSUE

FILE_LIBRARY

FILE_TEMPLATE

FILE_IUS

FILE_LANE

FILE_FILE

FILE_STUDY_TITLE

FILE_STUDY_SWID

FILE_EXPERIMENT_NAME

FILE_EXPERIMENT_SWID

FILE_PARENT_SAMPLE_NAME

FILE_PARENT_SAMPLE_SWID

FILE_SAMPLE_NAME

FILE_SAMPLE_SWID

FILE_SEQUENCER_NAME

FILE_SEQUENCER_SWID

FILE_LANE_NAME

FILE_LANE_NUMBER

FILE_LANE_SWID

FILE_IUS_TAG

FILE_IUS_SWID

FILE_WF_NAME

FILE_WF_VERSION

FILE_WF_SWID

FILE_RUN_NAME

FILE_RUN_SWID

FILE_PROCESSING_ALG

FILE_PROCESSING_SWID

FILE_META_TYPE

FILE_SWID

FILE_PATH

SAMPLE_SAMPLE

SAMPLE_CHILD

Constructor Detail

StudyReportTableController

Method Detail

handleRequestInternal

setStudyService

setSampleService

setFileReportService

setSampleReportService