Package | Description |
---|---|
net.sourceforge.seqware.pipeline.plugins.checkdb |
Check the metadb for errors in convention and structure.
|
net.sourceforge.seqware.pipeline.plugins.checkdb.plugins |
Basic checks for all SeqWare databases as well as examples for site specific checks.
|
Modifier and Type | Method and Description |
---|---|
void |
CheckDBPluginInterface.check(SelectQueryRunner qRunner,
SortedMap<CheckDBPluginInterface.Level,Set<String>> results) |
Modifier and Type | Method and Description |
---|---|
void |
AttributePlugin.check(SelectQueryRunner qRunner,
SortedMap<CheckDBPluginInterface.Level,Set<String>> result) |
void |
WorkflowRunConventionsPlugin.check(SelectQueryRunner qRunner,
SortedMap<CheckDBPluginInterface.Level,Set<String>> result) |
void |
SampleHierarchyPlugin.check(SelectQueryRunner qRunner,
SortedMap<CheckDBPluginInterface.Level,Set<String>> result) |
void |
OrphanCheckerPlugin.check(SelectQueryRunner qRunner,
SortedMap<CheckDBPluginInterface.Level,Set<String>> result) |
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