| Package | Description |
|---|---|
| net.sourceforge.seqware.pipeline.plugins.batchmetadatainjection |
PDE's batch metadata injection utility
|
| Modifier and Type | Method and Description |
|---|---|
protected SampleInfo |
BatchMetadataParser.generateSampleInfo(String prettyName,
String projectCode,
String individualNumber,
String librarySourceTemplateType,
String tissueOrigin,
String tissueType,
String libraryType,
String librarySizeCode,
String barcode,
int organismId,
String targetedResequencing,
String tissuePreparation,
String sampleDescription,
String iusName,
String iusDescription)
Generates a sample info object given the fields, and prompts for null fields if the interactive flag is on.
|
| Modifier and Type | Method and Description |
|---|---|
Set<SampleInfo> |
LaneInfo.getSamples()
Get the value of samples
|
| Modifier and Type | Method and Description |
|---|---|
int |
SampleInfo.compareTo(SampleInfo otherSample) |
protected void |
BatchMetadataParser.printSampleInfo(SampleInfo info,
Appendable writer) |
| Modifier and Type | Method and Description |
|---|---|
void |
LaneInfo.setSamples(Set<SampleInfo> samples)
Set the value of samples
|
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