| Package | Description | 
|---|---|
| io.seqware.pipeline.plugins | 
 Newly written SeqWare plugins 
 | 
| io.seqware.pipeline.plugins.sanity | 
 Base classes for the sanity check tool. 
 | 
| net.sourceforge.seqware.pipeline.deciders | 
 BasicDecider. 
 | 
| net.sourceforge.seqware.pipeline.plugin | 
 Interface for plugins and the workflow launcher for some reason. 
 | 
| net.sourceforge.seqware.pipeline.plugins | 
 Create and manipulate databases for extended testing. 
 | 
| net.sourceforge.seqware.pipeline.plugins.checkdb | 
 Check the metadb for errors in convention and structure. 
 | 
| net.sourceforge.seqware.pipeline.plugins.deletion | 
 Implementation for the deletion tool that can delete workflow runs. 
 | 
| net.sourceforge.seqware.pipeline.plugins.fileprovenance | 
 Dump out the file provenance report to the user. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
| Class and Description | 
|---|
| Plugin
 
 Abstract Plugin class. 
 | 
| PluginInterface
 
 PluginInterface interface. 
 | 
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