| Package | Description | 
|---|---|
| net.sourceforge.seqware.pipeline.module | 
 This package provides the SeqWare module interface and API, including
 common code and classes. 
 | 
| net.sourceforge.seqware.pipeline.modules | 
 Executables that can be called by workflows and users. 
 | 
| net.sourceforge.seqware.pipeline.modules.utilities | 
 Modules that are used by workflows. 
 | 
| net.sourceforge.seqware.pipeline.plugins | 
 Create and manipulate databases for extended testing. 
 | 
| net.sourceforge.seqware.pipeline.runner | 
 Runs plugins and modules. 
 | 
| Class and Description | 
|---|
| Module
 
 Abstract Module class. 
 | 
| ModuleInterface
 
 This interface defines the required behavior of a SeqWare module. 
 | 
| ModuleMethod
 Enumeration class for ModuleMethod
 
 Created by IntelliJ IDEA. 
 | 
| Class and Description | 
|---|
| Module
 
 Abstract Module class. 
 | 
| ModuleInterface
 
 This interface defines the required behavior of a SeqWare module. 
 | 
| Class and Description | 
|---|
| Module
 
 Abstract Module class. 
 | 
| ModuleInterface
 
 This interface defines the required behavior of a SeqWare module. 
 | 
| Class and Description | 
|---|
| ModuleInterface
 
 This interface defines the required behavior of a SeqWare module. 
 | 
| Class and Description | 
|---|
| Module
 
 Abstract Module class. 
 | 
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