TestModule (SeqWare 1.1.2 API)

java.lang.Object
- net.sourceforge.seqware.pipeline.module.Module
- - net.sourceforge.seqware.pipeline.module.TestModule

All Implemented Interfaces:

ModuleInterface
```
public class TestModule
extends Module
```
This is an empty module mainly for testing purpose. Created by IntelliJ IDEA. User: xiao Date: 7/21/11 Time: 3:53 PM To change this template use File | Settings | File Templates.

Version:

$Id: $Id

Author:

boconnor

Field Summary
- Fields inherited from class net.sourceforge.seqware.pipeline.module.Module
  processingAccession, VERSION

Constructor Summary

Constructors
Constructor and Description

TestModule()

Constructors
Constructor and Description
`TestModule()`

Method Summary

Methods
Modifier and Type	Method and Description
`ReturnValue`	`do_run()` do_run.
`ReturnValue`	`do_test()` do_test.
`ReturnValue`	`do_verify_input()` do_verify_input.
`ReturnValue`	`do_verify_output()` do_verify_output.
`ReturnValue`	`do_verify_parameters()` do_verify_parameters.
`String`	`getAlgorithm()` Getter for the field `algorithm`.
`static void`	`main(String[] args)` main.

Methods inherited from class net.sourceforge.seqware.pipeline.module.Module
clean_up, get_galaxy_xml, get_syntax, getMetadata, getOptionParser, getParameters, getProcessingAccession, getStderrFile, getStdoutFile, init, setAlgorithm, setMetadata, setParameters, setProcessingAccession, setStderrFile, setStdoutFile

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - TestModule
```
public TestModule()
```
- Method Detail
  - getAlgorithm
```
public String getAlgorithm()
```
    Getter for the field algorithm.
    
    Specified by:
    
    getAlgorithm in interface ModuleInterface
    
    Overrides:
    
    getAlgorithm in class Module
    
    Returns:
  - do_run
```
public ReturnValue do_run()
```
    do_run.
    
    Specified by:
    
    do_run in interface ModuleInterface
    
    Specified by:
    
    do_run in class Module
    
    Returns:
  - do_test
```
public ReturnValue do_test()
```
    do_test.
    
    Specified by:
    
    do_test in interface ModuleInterface
    
    Specified by:
    
    do_test in class Module
    
    Returns:
  - do_verify_input
```
public ReturnValue do_verify_input()
```
    do_verify_input.
    
    Specified by:
    
    do_verify_input in interface ModuleInterface
    
    Specified by:
    
    do_verify_input in class Module
    
    Returns:
  - do_verify_parameters
```
public ReturnValue do_verify_parameters()
```
    do_verify_parameters.
    
    Specified by:
    
    do_verify_parameters in interface ModuleInterface
    
    Specified by:
    
    do_verify_parameters in class Module
    
    Returns:
  - do_verify_output
```
public ReturnValue do_verify_output()
```
    do_verify_output.
    
    Specified by:
    
    do_verify_output in interface ModuleInterface
    
    Specified by:
    
    do_verify_output in class Module
    
    Returns:
  - main
```
public static void main(String[] args)
```
    main.
    
    Parameters:
    args - an array of String objects.

Class TestModule

Field Summary

Fields inherited from class net.sourceforge.seqware.pipeline.module.Module

Constructor Summary

Method Summary

Methods inherited from class net.sourceforge.seqware.pipeline.module.Module

Methods inherited from class java.lang.Object

Constructor Detail

TestModule

Method Detail

getAlgorithm

do_run

do_test

do_verify_input

do_verify_parameters

do_verify_output

main