Package | Description |
---|---|
net.sourceforge.seqware.common.dao |
More hibernate auto-generated.
|
net.sourceforge.seqware.common.dao.hibernate |
More hibernate auto-generated.
|
net.sourceforge.seqware.common.metadata |
Critical classes that effectively convert API calls into actions against the DB and web service.
|
net.sourceforge.seqware.common.model |
Hibernate model classes for the metadb.
|
Modifier and Type | Method and Description |
---|---|
List<SampleAttribute> |
SampleAttributeDAO.findAll(Sample sample)
findAll.
|
List<SampleAttribute> |
SampleAttributeDAO.list()
list.
|
Modifier and Type | Method and Description |
---|---|
void |
SampleAttributeDAO.delete(SampleAttribute sampleAttribute)
delete.
|
void |
SampleAttributeDAO.insert(SampleAttribute sampleAttribute)
insert.
|
void |
SampleAttributeDAO.update(SampleAttribute sampleAttribute)
update.
|
Modifier and Type | Method and Description |
---|---|
List<SampleAttribute> |
SampleAttributeDAOHibernate.findAll(Sample sample)
findAll.
|
List<SampleAttribute> |
SampleAttributeDAOHibernate.list()
list.
|
Modifier and Type | Method and Description |
---|---|
void |
SampleAttributeDAOHibernate.delete(SampleAttribute sampleAttribute)
delete.
|
void |
SampleAttributeDAOHibernate.insert(SampleAttribute sampleAttribute)
insert.
|
void |
SampleAttributeDAOHibernate.update(SampleAttribute sampleAttribute)
update.
|
Modifier and Type | Method and Description |
---|---|
void |
MetadataWS.annotateSample(int swid,
SampleAttribute att,
Boolean skip)
annotateSample.
|
void |
Metadata.annotateSample(int sampleSWID,
SampleAttribute att,
Boolean skip)
annotateSample.
|
void |
MetadataNoConnection.annotateSample(int sampleSWID,
SampleAttribute att,
Boolean skip)
annotateSample.
|
void |
MetadataDB.annotateSample(int sampleSWID,
SampleAttribute att,
Boolean skip)
annotateSample.
|
void |
MetadataInMemory.annotateSample(int sampleSWID,
SampleAttribute att,
Boolean skip) |
Modifier and Type | Method and Description |
---|---|
void |
MetadataWS.annotateSample(int sampleSWID,
Set<SampleAttribute> atts)
annotateSample.
|
void |
Metadata.annotateSample(int sampleSWID,
Set<SampleAttribute> atts)
annotateSample.
|
void |
MetadataNoConnection.annotateSample(int sampleSWID,
Set<SampleAttribute> atts)
annotateSample.
|
void |
MetadataDB.annotateSample(int sampleSWID,
Set<SampleAttribute> atts)
annotateSample.
|
void |
MetadataInMemory.annotateSample(int sampleSWID,
Set<SampleAttribute> atts) |
Modifier and Type | Method and Description |
---|---|
Set<SampleAttribute> |
Sample.getAnnotations() |
Set<SampleAttribute> |
Sample.getSampleAttributes()
Getter for the field
sampleAttributes . |
Modifier and Type | Method and Description |
---|---|
void |
Sample.setSampleAttributes(Set<SampleAttribute> sampleAttributes)
Setter for the field
sampleAttributes . |
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