| Package | Description |
|---|---|
| net.sourceforge.seqware.common.business |
Looks like auto-generated classes for Hibernate.
|
| net.sourceforge.seqware.common.business.impl |
Looks like auto-generated implementation for Hibernate classes.
|
| net.sourceforge.seqware.common.dao |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.dao.hibernate |
More hibernate auto-generated.
|
| net.sourceforge.seqware.common.metadata |
Critical classes that effectively convert API calls into actions against the DB and web service.
|
| net.sourceforge.seqware.common.model |
Hibernate model classes for the metadb.
|
| net.sourceforge.seqware.common.module |
Utility classes really.
|
| Modifier and Type | Method and Description |
|---|---|
FileAttribute |
FileAttributeService.get(Integer fileSwa,
Integer id)
get.
|
| Modifier and Type | Method and Description |
|---|---|
Set<FileAttribute> |
FileAttributeService.getFileAttributes(Integer fileSwa)
Returns a complete set of attributes for a give File.
|
| Modifier and Type | Method and Description |
|---|---|
Integer |
FileAttributeService.add(Integer fileSwa,
FileAttribute fileAttribute)
add.
|
void |
FileAttributeService.update(Integer fileSwa,
FileAttribute fileAttribute)
update.
|
| Modifier and Type | Method and Description |
|---|---|
FileAttribute |
FileAttributeServiceImpl.get(Integer fileSwa,
Integer id)
get.
|
| Modifier and Type | Method and Description |
|---|---|
Set<FileAttribute> |
FileAttributeServiceImpl.getFileAttributes(Integer fileSwa)
Returns a complete set of attributes for a give File.
|
| Modifier and Type | Method and Description |
|---|---|
Integer |
FileAttributeServiceImpl.add(Integer fileSwa,
FileAttribute fileAttribute)
add.
|
void |
FileAttributeServiceImpl.update(Integer fileSwa,
FileAttribute fileAttribute)
update.
|
| Modifier and Type | Method and Description |
|---|---|
FileAttribute |
FileAttributeDAO.get(Integer id)
get.
|
| Modifier and Type | Method and Description |
|---|---|
List<FileAttribute> |
FileAttributeDAO.get(File file)
get.
|
List<FileAttribute> |
FileAttributeDAO.getAll()
getAll.
|
| Modifier and Type | Method and Description |
|---|---|
Integer |
FileAttributeDAO.add(FileAttribute fileAttribute)
add.
|
void |
FileAttributeDAO.delete(FileAttribute fileAttribute)
delete.
|
void |
FileAttributeDAO.update(FileAttribute fileAttribute)
update.
|
| Modifier and Type | Method and Description |
|---|---|
FileAttribute |
FileAttributeDAOHibernate.get(Integer id)
get.
|
| Modifier and Type | Method and Description |
|---|---|
List<FileAttribute> |
FileAttributeDAOHibernate.get(File file)
get.
|
List<FileAttribute> |
FileAttributeDAOHibernate.getAll()
getAll.
|
| Modifier and Type | Method and Description |
|---|---|
Integer |
FileAttributeDAOHibernate.add(FileAttribute fileAttribute)
add.
|
void |
FileAttributeDAOHibernate.delete(FileAttribute fileAttribute)
delete.
|
void |
FileAttributeDAOHibernate.update(FileAttribute fileAttribute)
update.
|
| Modifier and Type | Method and Description |
|---|---|
void |
MetadataWS.annotateFile(int fileSWID,
FileAttribute att,
Boolean skip)
annotateFile.
|
void |
Metadata.annotateFile(int laneSWID,
FileAttribute iusAtt,
Boolean skip)
annotateFile.
|
void |
MetadataNoConnection.annotateFile(int laneSWID,
FileAttribute iusAtt,
Boolean skip) |
void |
MetadataDB.annotateFile(int laneSWID,
FileAttribute iusAtt,
Boolean skip) |
void |
MetadataInMemory.annotateFile(int laneSWID,
FileAttribute iusAtt,
Boolean skip) |
| Modifier and Type | Method and Description |
|---|---|
void |
MetadataWS.annotateFile(int fileSWID,
Set<FileAttribute> atts)
annotateFile.
|
void |
Metadata.annotateFile(int fileSWID,
Set<FileAttribute> iusAtts)
annotateFile.
|
void |
MetadataNoConnection.annotateFile(int fileSWID,
Set<FileAttribute> iusAtts) |
void |
MetadataDB.annotateFile(int fileSWID,
Set<FileAttribute> iusAtts) |
void |
MetadataInMemory.annotateFile(int fileSWID,
Set<FileAttribute> iusAtts) |
| Modifier and Type | Method and Description |
|---|---|
Set<FileAttribute> |
File.getAnnotations() |
Set<FileAttribute> |
File.getFileAttributes()
Getter for the field
fileAttributes. |
| Modifier and Type | Method and Description |
|---|---|
void |
File.setFileAttributes(Set<FileAttribute> fileAttributes)
Setter for the field
fileAttributes. |
| Modifier and Type | Method and Description |
|---|---|
Set<FileAttribute> |
FileMetadata.getAnnotations() |
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