WorkflowRunReport (SeqWare 1.1.2 API)

java.lang.Object
- net.sourceforge.seqware.common.hibernate.WorkflowRunReport

```
public class WorkflowRunReport
extends Object
```
Reports on workflow run metadata, returning either all workflow runs, all runs of a particular workflow, or a specific workflow run. The results can be filtered according to Date on the WorkflowRun's createTimestamp.

Version:

$Id: $Id

Author:

mtaschuk

Constructor Summary

Constructors
Constructor and Description

WorkflowRunReport()

Constructors
Constructor and Description
`WorkflowRunReport()`

Method Summary

Methods
Modifier and Type	Method and Description
`String`	`calculateTotalTime(Collection<Processing> processings)` calculateTotalTime.
`protected Collection<Processing>`	`collectProcessings(WorkflowRun wr)`
`protected Collection<File>`	`findFiles(Collection<Processing> processings)`
`protected Collection<Processing>`	`findParents(Collection<Processing> processings, int workflowRunSWID, boolean findImmediateOnly)`
`Collection<WorkflowRunReportRow>`	`getAllRuns()` Find all of the workflow runs, and report on each of the workflow runs the files, samples and processing events associated with each.
`Collection<WorkflowRunReportRow>`	`getRunsByStatus(WorkflowRunStatus status)`
`Collection<WorkflowRunReportRow>`	`getRunsFromWorkflow(Integer workflowSWID)` Using a workflow SWID, find all of the workflow runs, and report on each of the workflow runs the files, samples and processing events associated with each.
`WorkflowRunReportRow`	`getSingleWorkflowRun(Integer workflowRunSWID)` Using a workflow run SWID, report on the files, samples and processing events associated with the run.
`void`	`setEarliestDate(Date earliestDate)` Set the value of earliestDate.
`void`	`setLatestDate(Date latestDate)` Set the value of latestDate.
`void`	`setStatus(WorkflowRunStatus status)`
`protected Object`	`testIfNull(Object o)` testIfNull.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - WorkflowRunReport
```
public WorkflowRunReport()
```
- Method Detail
  - setLatestDate
```
public void setLatestDate(Date latestDate)
```
    Set the value of latestDate. This date must be set prior to calling other methods in order to filter collections of workflow runs.
    
    Parameters:
    latestDate - new value of latestDate
  - setEarliestDate
```
public void setEarliestDate(Date earliestDate)
```
    Set the value of earliestDate. This date must be set prior to calling other methods in order to filter collections of workflow runs.
    
    Parameters:
    earliestDate - new value of earliestDate
  - getAllRuns
```
public Collection<WorkflowRunReportRow> getAllRuns()
```
    Find all of the workflow runs, and report on each of the workflow runs the files, samples and processing events associated with each. If the latest date and earliest date have been set in this class, the workflow runs will be filtered according to the createTimestamp.
    
    Returns:
    a collection of workflow run reports
  - getSingleWorkflowRun
```
public WorkflowRunReportRow getSingleWorkflowRun(Integer workflowRunSWID)
```
    Using a workflow run SWID, report on the files, samples and processing events associated with the run. Setting the earliest and latest date has no effect on this method.
    
    Parameters:
    workflowRunSWID - a Integer object.
    
    Returns:
    a workflow run report
  - getRunsFromWorkflow
```
public Collection<WorkflowRunReportRow> getRunsFromWorkflow(Integer workflowSWID)
```
    Using a workflow SWID, find all of the workflow runs, and report on each of the workflow runs the files, samples and processing events associated with each. If the latest date and earliest date have been set in this class, the workflow runs will be filtered according to the createTimestamp.
    
    Parameters:
    workflowSWID - the SWID of the workflow
    
    Returns:
    a collection of workflow run reports
  - collectProcessings
```
protected Collection<Processing> collectProcessings(WorkflowRun wr)
```
  - calculateTotalTime
```
public String calculateTotalTime(Collection<Processing> processings)
```
    calculateTotalTime.
    
    Parameters:
    processings - a Collection object.
    
    Returns:
    a String object.
  - findFiles
```
protected Collection<File> findFiles(Collection<Processing> processings)
```
  - findParents
```
protected Collection<Processing> findParents(Collection<Processing> processings,
                                 int workflowRunSWID,
                                 boolean findImmediateOnly)
```
  - testIfNull
```
protected Object testIfNull(Object o)
```
    testIfNull.
    
    Parameters:
    o - a Object object.
    
    Returns:
    a Object object.
  - setStatus
```
public void setStatus(WorkflowRunStatus status)
```
  - getRunsByStatus
```
public Collection<WorkflowRunReportRow> getRunsByStatus(WorkflowRunStatus status)
```

Class WorkflowRunReport

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

WorkflowRunReport

Method Detail

setLatestDate

setEarliestDate

getAllRuns

getSingleWorkflowRun

getRunsFromWorkflow

collectProcessings

calculateTotalTime

findFiles

findParents

testIfNull

setStatus

getRunsByStatus