ProvidedBundleCLIUserPhase5 (SeqWare 1.1.2 API)

java.lang.Object
- io.seqware.pipeline.plugins.sanity.ProvidedBundleUserPhase5
- - io.seqware.pipeline.plugins.sanity.ProvidedBundleCLIUserPhase5

```
public class ProvidedBundleCLIUserPhase5
extends ProvidedBundleUserPhase5
```
Build and install a bundle, used by both the User tutorial and the Developer tutorial

Author:

dyuen

- Field Summary
  - Fields inherited from class io.seqware.pipeline.plugins.sanity.ProvidedBundleUserPhase5
    WORKFLOW
- Constructor Summary
  
  Constructors
  Constructor and Description
  
  ProvidedBundleCLIUserPhase5()
- Method Summary
  
  Methods
  Modifier and Type Method and Description
  
  protected File exportINI(net.sourceforge.seqware.pipeline.plugins.PluginRunnerET pit, List<Integer> accessions)
  - Methods inherited from class io.seqware.pipeline.plugins.sanity.ProvidedBundleUserPhase5
    installHandyProvidedBundleTest
  - Methods inherited from class java.lang.Object
    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructors
Constructor and Description
`ProvidedBundleCLIUserPhase5()`

Methods
Modifier and Type	Method and Description
`protected File`	`exportINI(net.sourceforge.seqware.pipeline.plugins.PluginRunnerET pit, List<Integer> accessions)`

Constructor Detail
- ProvidedBundleCLIUserPhase5
```
public ProvidedBundleCLIUserPhase5()
```

Method Detail

exportINI

protected File exportINI(net.sourceforge.seqware.pipeline.plugins.PluginRunnerET pit,
             List<Integer> accessions)
                  throws IOException

Overrides:: exportINI in class ProvidedBundleUserPhase5
Throws:: IOException

Class ProvidedBundleCLIUserPhase5

Field Summary

Fields inherited from class io.seqware.pipeline.plugins.sanity.ProvidedBundleUserPhase5

Constructor Summary

Method Summary

Methods inherited from class io.seqware.pipeline.plugins.sanity.ProvidedBundleUserPhase5

Methods inherited from class java.lang.Object

Constructor Detail

ProvidedBundleCLIUserPhase5

Method Detail

exportINI