This guide will collect the documentation for our various APIs including Javadoc and RESTful web interfaces.
The javadoc and test javadoc are intended for use by SeqWare pipeline developers and workflow developers.
These docs are generated by another nanoc template (just to make it complicated) but will be merged into the main site soon. The API covers the SeqWare Web Service sub-project and is the main RESTful entry point for the project.
These docs were generated by Swagger. The API is not currently hooked up to a Hadoop back-end, so queries will not return any valid data. However, this gives an idea as to the general shape of the API.